Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00977
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1XD36 Cluster: Vrille; n=3; Endopterygota|Rep: Vrille ...    47   4e-04
UniRef50_Q17K75 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  

>UniRef50_Q1XD36 Cluster: Vrille; n=3; Endopterygota|Rep: Vrille -
           Danaus plexippus (Monarch)
          Length = 364

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 1   ARLATEVATLKNMMHQNKTRAHEH 72
           ARLATEVATLKNMMHQNK+R+ EH
Sbjct: 341 ARLATEVATLKNMMHQNKSRSLEH 364


>UniRef50_Q17K75 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 91

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 489 FVIYGYNMYISRTEKSVKFQTNKKKKK 569
           FV +GY +Y+S TEK  K Q  +K K+
Sbjct: 60  FVFFGYKLYLSLTEKERKLQEKQKAKQ 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,852,847
Number of Sequences: 1657284
Number of extensions: 7440830
Number of successful extensions: 13172
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13079
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)