Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00976
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.67 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.2  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 227 HYTRNFYDTVDSLYTLFGCDNSMYLSTRVGL 319
           H    FY  VD  Y +  C N +  + + G+
Sbjct: 120 HICDKFYYCVDGKYNMITCPNGLVYNDKAGI 150


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
 Frame = -2

Query: 390  WTELQCRWPQGWRC--PRTRALENITKPTLVDK 298
            W +  C WP+   C    +  +   T P + DK
Sbjct: 2271 WNKDHCDWPENTECHPDASSTMAPSTTPMVPDK 2303



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 284  HNQTACIENQQYRRNYVYSARSVQNAIFL 198
            H+  A  +NQ Y+R   Y A+ ++ ++ L
Sbjct: 1447 HDSWADFDNQFYKRVTGYKAKGIKVSLAL 1475


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 376 MQVATRLALPSNSSPRKYNQTYSC 305
           ++   RLA P+N SP  Y    +C
Sbjct: 707 LKSGNRLARPANCSPDLYAVMLNC 730


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 209 RFERSGHYTRNFYDTVDSLYTLFG 280
           +FE   +Y R   +TVD   +LFG
Sbjct: 349 KFESFVYYHRILGETVDLFNSLFG 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,891
Number of Sequences: 336
Number of extensions: 4059
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)