Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00976
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 33 0.30
AL132948-42|CAN86925.1| 131|Caenorhabditis elegans Hypothetical... 31 0.68
AL132948-41|CAC51075.1| 129|Caenorhabditis elegans Hypothetical... 31 0.68
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81528-8|CAB04288.2| 643|Caenorhabditis elegans Hypothetical pr... 28 6.4
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = -1
Query: 760 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSD 581
A V + GWL G FD+ K + + A G+ + + LH+ V N DFG S+Y KV+
Sbjct: 141 AGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKVAS 200
Query: 580 KLDCGVSMKWTAGSADTLFGVGAKTRWTKTRLCTPRSTTSPSS 452
++ G + W G + + T++ +R T R+ + SS
Sbjct: 201 NVEVGTQLGWKVGGNGADYALA--TKYAPSRDLTVRAKVNSSS 241
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 506 ALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 333
A +D ++ AK+N+ S + + L P + LTLS + +A HK G+ LE +P
Sbjct: 226 APSRDLTVRAKVNSSSQVAVAATHSLSPALKLTLSTQFNLAANDA--HKFGLGLEFDP 281
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -1
Query: 727 GVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT 548
G QF+T++ K GY+ +L N +DFG + +++DC VS KWT
Sbjct: 657 GNRNQFETEEE--CKQICLPGYEKSK-SLIPNNQLLEDFGNTEVDDGGERVDCEVS-KWT 712
Query: 547 A-GSADTLFGVGAKTR 503
A GS G G K+R
Sbjct: 713 AWGSCSVSCGRGKKSR 728
>AL132948-42|CAN86925.1| 131|Caenorhabditis elegans Hypothetical
protein Y39B6A.3b protein.
Length = 131
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -3
Query: 515 SEDALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELE 336
+ +A+ + L A+ N+ + + +G +QK G+T TL A D Q F+ + G+ + +E
Sbjct: 30 TNEAVSRIRVLLAQQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQDGIKVWIE 89
Query: 335 P 333
P
Sbjct: 90 P 90
>AL132948-41|CAC51075.1| 129|Caenorhabditis elegans Hypothetical
protein Y39B6A.3a protein.
Length = 129
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -3
Query: 515 SEDALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELE 336
+ +A+ + L A+ N+ + + +G +QK G+T TL A D Q F+ + G+ + +E
Sbjct: 28 TNEAVSRIRVLLAQQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQDGIKVWIE 87
Query: 335 P 333
P
Sbjct: 88 P 88
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +3
Query: 186 RKAGKEYCVLNAPGTIHVISTILLILYTRCLVVI 287
RK +++C+LNA T+ ++S ++LI++ L++I
Sbjct: 68 RKVQRKFCMLNAKWTV-ILSIVILIVFVVLLLLI 100
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +3
Query: 186 RKAGKEYCVLNAPGTIHVISTILLILYTRCLVVI 287
RK +++C+LNA T+ ++S ++LI++ L++I
Sbjct: 71 RKVQRKFCMLNAKWTV-ILSIVILIVFVVLLLLI 103
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -1
Query: 508 TRWTKTRLCTPRSTTSPSSVLVTNRNYAQA*PLHCLLPSMDRTSMQVATRLALPSNSSPR 329
T+ ++TR T STT+ T+ +A P PS ++ AT LP+ S R
Sbjct: 238 TKPSRTRSLTSTSTTTAKLPTTTSTTFAA--PQASTEPSEATEALATATPADLPTKPSGR 295
Query: 328 KYNQTYSCR*IHTVITTK 275
+ R + + TTK
Sbjct: 296 EITTITGTRKLSSTSTTK 313
>Z81528-8|CAB04288.2| 643|Caenorhabditis elegans Hypothetical
protein F35E2.9 protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 709 DTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSADT 530
D K S + F + S +H N+ GS+++ + KL G S K +T
Sbjct: 455 DENSIKRSDSGFDAYFFSHSIWMHKNITVNMSTSGSLFKDPNSKL-YGTSTK-IVNDKET 512
Query: 529 LFGVG 515
+FG+G
Sbjct: 513 VFGIG 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,372,183
Number of Sequences: 27780
Number of extensions: 369884
Number of successful extensions: 782
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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