Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00975
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.41 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.95 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   1.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   6.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   8.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.41
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1   VDRSSPPSLPSNRCGSRNRS--TTSLVPPLYTGSASKR 108
           ++ ++PP  P  R  S   +  T S +PPLY    +KR
Sbjct: 726 MENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKR 763


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 25  LPSNRCGSRNRSTTSLVPP 81
           LP++RC SR  S+ SLV P
Sbjct: 79  LPNSRCNSR-ESSDSLVQP 96


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 141 FCCRAS*LKVSTLRSTSC 88
           +CCR S L+  T+  T C
Sbjct: 82  YCCRESFLRERTITLTHC 99


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 22  SLPSNRCGSRNRSTTSLVPPLYTGSASK 105
           SL S    + N+S+TS  PP +  S SK
Sbjct: 56  SLLSPSGNTPNKSSTSPYPPNHPLSGSK 83


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 115 FKL*CPTAEPQEGGSNYA 168
           FK+ C   E Q+ G+N A
Sbjct: 85  FKIHCLLQEQQQAGANMA 102


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
          vasopressin-like peptide protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 88 CTMEGPDSSYSCFEIHIC 35
          C   GP  S  CF   IC
Sbjct: 45 CVSCGPGQSGQCFGPSIC 62


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 10  SSPPSLPSNRCGSRNRSTTS 69
           S+P SLP+ R  + N + +S
Sbjct: 79  STPSSLPTQRTSTSNPTYSS 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,069
Number of Sequences: 336
Number of extensions: 1586
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)