Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00974
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 80 2e-15
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 30 2.1
U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical pr... 29 3.7
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 29 3.7
AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine re... 28 8.5
AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine re... 28 8.5
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 259 IFSLLHRVFVAEPLENLKQSALKSGVSEDEFQAFLVYAGGLFANSGNYKGFGDTKFIPNL 438
IF +L+R+F +E +E LK+ AL G ++ E+QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 99 IFYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGV 158
Query: 439 PAESLELIIKAS 474
+ +++ S
Sbjct: 159 EQTKIRALLEKS 170
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 507 KLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLVNDWMKIKLIEAYICRTF 686
K W++ + I L LG +KGVT Y SSN T+ D+ ++ + K + +E++ R F
Sbjct: 180 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKIDRFFKQRNVESWNSRLF 239
Query: 687 KTVADDGLPLYTIHLASVE 743
K V DG YTI LAS E
Sbjct: 240 KEVGSDGKTTYTIKLASSE 258
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 89 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 253
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 42 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 96
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 259 IFSLLHRVFVAEPLENLKQSALKSGVSEDEFQAFLVYAGGLFANSGNYKGFGDTKFIPNL 438
IF +L+R+F +E +E LK+ AL G ++ E+QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 61 IFYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGV 120
Query: 439 PAESLELIIKAS 474
+ +++ S
Sbjct: 121 EQTKIRALLEKS 132
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 507 KLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLVNDWMKIKLIEAYICRTF 686
K W++ + I L LG +KGVT Y SSN T+ D+ ++ + K + +E++ R F
Sbjct: 142 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKIDRFFKQRNVESWNSRLF 201
Query: 687 KTVADDGLPLYTIHLASVE 743
K V DG YTI LAS E
Sbjct: 202 KEVGSDGKTTYTIKLASSE 220
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 89 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 253
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 4 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 58
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 259 IFSLLHRVFVAEPLENLKQSALKSGVSEDEFQAFLVYAGGLFANSGNYKGFGDTKFIPNL 438
IF +L+R+F +E +E LK+ AL G ++ E+QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 99 IFYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGV 158
Query: 439 PAESLELIIKAS 474
+ +++ S
Sbjct: 159 EQTKIRALLEKS 170
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 507 KLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLVNDWMKIKLIEAYICRTF 686
K W++ + I L LG +KGVT Y SSN T+ D+ ++ + K + +E++ R F
Sbjct: 180 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKIDRFFKQRNVESWNSRLF 239
Query: 687 KTVADDGLPLYTIHLASVE 743
K V DG YTI LAS E
Sbjct: 240 KEVGSDGKTTYTIKLASSE 258
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 89 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 253
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 42 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 96
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein
ZK593.5 protein.
Length = 1326
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +1
Query: 274 HRVFVAEPLENLKQSALKSGVSEDEFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAESL 453
H V + LE LK+S S D F LVY +F+ GF ++ + A
Sbjct: 779 HEKTVDQYLELLKKSRFDENTSLDSFVRPLVYFQNMFSLHIGGDGFNAAHWVSEICAS-- 836
Query: 454 ELIIKASKAYEKDNTHILSY 513
+ A AY + NT +SY
Sbjct: 837 ---LSAGLAYCRVNTQRISY 853
>U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical
protein M02E1.1b protein.
Length = 688
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 379 LFANSGNYKGFGDTKFIPN---LPAESLELIIKASKAYEKDNTHILSYGKILK 528
L ANSG Y+ F + +PN L + + S+ Y + TH + + K+LK
Sbjct: 324 LLANSGRYRPFSFKRPVPNEIHLVEKQKRVSWMQSRNYYRYRTHKVDFKKLLK 376
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical
protein M02E1.1a protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 379 LFANSGNYKGFGDTKFIPN---LPAESLELIIKASKAYEKDNTHILSYGKILK 528
L ANSG Y+ F + +PN L + + S+ Y + TH + + K+LK
Sbjct: 324 LLANSGRYRPFSFKRPVPNEIHLVEKQKRVSWMQSRNYYRYRTHKVDFKKLLK 376
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 435 IRNELCITKTFIVTAVGK*TSCIDEKSLKFIFRYT 331
+R LC TK F TA G CIDE +KF+ +T
Sbjct: 183 LRQILCPTKEFF-TASGVYVVCIDEGYIKFLALFT 216
>AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform a protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 670 TFVVRSKLLLMTAYPYTPFILPASKHRQNHPT 765
TF+V + LL++T+ Y P I+ +SK + + PT
Sbjct: 205 TFIVLNSLLVITSLLYIPIII-SSKFKNSGPT 235
>AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform b protein.
Length = 324
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 670 TFVVRSKLLLMTAYPYTPFILPASKHRQNHPT 765
TF+V + LL++T+ Y P I+ +SK + + PT
Sbjct: 188 TFIVLNSLLVITSLLYIPIII-SSKFKNSGPT 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,200,467
Number of Sequences: 27780
Number of extensions: 378494
Number of successful extensions: 876
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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