Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00974
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    25   1.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   1.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   1.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    25   1.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   9.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.6  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 757 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLIFIQSLTRFESSSVQ 608
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 101 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 150


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 757 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLIFIQSLTRFESSSVQ 608
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 757 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLIFIQSLTRFESSSVQ 608
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 757 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLIFIQSLTRFESSSVQ 608
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 409 NLYSYRCWQIDLLHRREKPEIHLQIH 332
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 409 NLYSYRCWQIDLLHRREKPEIHLQIH 332
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 415 HQNLYSYRC 389
           H N+Y YRC
Sbjct: 39  HSNVYQYRC 47


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 656 FNFHPIVNEIRIFFGAVA*EICCYPLI 576
           F++    NEIRIF   +     C P+I
Sbjct: 199 FDYLTDTNEIRIFVATIFTFSYCIPMI 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,071
Number of Sequences: 438
Number of extensions: 4829
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)