Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00973
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical pr... 106 2e-23
U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exosto... 106 2e-23
AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfa... 106 2e-23
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 53 3e-07
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 53 3e-07
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 33 0.17
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 33 0.17
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 33 0.17
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 33 0.17
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 33 0.17
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 33 0.17
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 33 0.22
Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical p... 30 1.6
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 30 1.6
AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical ... 30 1.6
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.6
AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.6
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 30 2.1
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.1
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 30 2.1
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.3
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ... 28 6.3
AF016448-11|AAB65952.1| 102|Caenorhabditis elegans Groundhog (h... 28 8.3
>Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical
protein F12F6.3 protein.
Length = 382
Score = 106 bits (254), Expect = 2e-23
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 1 ANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQ 180
ANSTFC+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L
Sbjct: 267 ANSTFCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALS 326
Query: 181 VPELVRSVPPERILALRQQTQFLWDNIFHQLKKSSSQLLR-FYWNVFSLIEFQSNE 345
+PEL+ S R+ LR+ + ++D ++ S +LR + + + IE + ++
Sbjct: 327 IPELLMSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRIDNKIELEDHQ 382
>U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exostoses
homolog 1 protein.
Length = 378
Score = 106 bits (254), Expect = 2e-23
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 1 ANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQ 180
ANSTFC+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L
Sbjct: 263 ANSTFCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALS 322
Query: 181 VPELVRSVPPERILALRQQTQFLWDNIFHQLKKSSSQLLR-FYWNVFSLIEFQSNE 345
+PEL+ S R+ LR+ + ++D ++ S +LR + + + IE + ++
Sbjct: 323 IPELLMSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRIDNKIELEDHQ 378
>AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfate
polymerase protein.
Length = 382
Score = 106 bits (254), Expect = 2e-23
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 1 ANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQ 180
ANSTFC+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L
Sbjct: 267 ANSTFCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALS 326
Query: 181 VPELVRSVPPERILALRQQTQFLWDNIFHQLKKSSSQLLR-FYWNVFSLIEFQSNE 345
+PEL+ S R+ LR+ + ++D ++ S +LR + + + IE + ++
Sbjct: 327 IPELLMSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRIDNKIELEDHQ 382
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 4 NSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQV 183
+STFC + FL +L GCIP++LSN LPF + IDWRRA L +
Sbjct: 334 SSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEA 392
Query: 184 PELVRSVPPERILALRQQTQFLWDNIF---HQLKKSSSQLLRF 303
+V+S I+ +R+ + ++ H L +S LR+
Sbjct: 393 HFIVQSFEISDIIEMRRVGRLFYETYLADRHLLARSLLAALRY 435
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 4 NSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQV 183
+STFC + FL +L GCIP++LSN LPF + IDWRRA L +
Sbjct: 334 SSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEA 392
Query: 184 PELVRSVPPERILALRQQTQFLWDNIF---HQLKKSSSQLLRF 303
+V+S I+ +R+ + ++ H L +S LR+
Sbjct: 393 HFIVQSFEISDIIEMRRVGRLFYETYLADRHLLARSLLAALRY 435
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 4 NSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQV 183
+STFC + FL +L GCIP++LSN LPF + IDWRRA L +
Sbjct: 334 SSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEA 392
Query: 184 PELVRSVPPERILALRQQTQFLWDNIF---HQLKKSSSQLLRF 303
+V+S I+ +R+ + ++ H L +S LR+
Sbjct: 393 HFIVQSFEISDIIEMRRVGRLFYETYLADRHLLARSLLAALRY 435
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 32 PRATMQKV 9
P K+
Sbjct: 544 PECIYCKL 551
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 44 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 101
Query: 32 PRATMQKV 9
P K+
Sbjct: 102 PECIYCKL 109
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 566
Query: 32 PRATMQKV 9
P K+
Sbjct: 567 PECIYCKL 574
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 566
Query: 32 PRATMQKV 9
P K+
Sbjct: 567 PECIYCKL 574
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = -3
Query: 212 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 33
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 66 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 123
Query: 32 P 30
P
Sbjct: 124 P 124
>Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 476 SSCSINTSDGTPHTPGNSFTALLYVQATSPALHKLLANIASSEFCEKVVLVWDS 637
S+ T G+ T G + A QATS A K L N ++ +V +W S
Sbjct: 315 STTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLKKKYYSILVCIWSS 368
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +3
Query: 432 PVLEAPS-APFTSLAPLPV---PSIPQMAPLTLL 521
PVL AP+ AP LAP PV P+IP AP LL
Sbjct: 130 PVLAAPAFAPAPILAPRPVLAAPAIPAFAPAPLL 163
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 420 PISSPVLEAPSAPFTSLAPLPVPSIPQMAP 509
P+++PVL A + APL P P +AP
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAP 79
>AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 476 SSCSINTSDGTPHTPGNSFTALLYVQATSPALHKLLANIASSEFCEKVVLVWDS 637
S+ T G+ T G + A QATS A K L N ++ +V +W S
Sbjct: 315 STTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLKKKYYSILVCIWSS 368
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 366 SPGALGTLAAYGDSRSHYPISSPVLEAPSAPFTSLAPLPVPSIPQMAPLTL 518
S + L D + YP +E P A +T+ P P P +P M L
Sbjct: 48 SDSSCAALYPASDPATGYPAPGNDVERPFACYTTATPTPAPVVPDMRSAAL 98
>AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.4 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 366 SPGALGTLAAYGDSRSHYPISSPVLEAPSAPFTSLAPLPVPSIPQMAPLTL 518
S + L D + YP +E P A +T+ P P P +P M L
Sbjct: 48 SDSSCAALYPASDPATGYPAPGNDVERPFACYTTATPTPAPVVPDMRSAAL 98
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -3
Query: 230 LSARMRSGGTERTSSGTCNNKRSSAQITA--RLQSIFSSKGNLHPLLSKTGIHPAAKASR 57
+ + R+ GT S+ T + S + A R QS+F G+ H + S T P + +
Sbjct: 408 MQLQQRADGTPNGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQ 467
Query: 56 NL*DPNRLPRATMQKV 9
DPN P K+
Sbjct: 468 AHNDPNYTPECIYCKL 483
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical protein
F41H10.3a protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 336 KQRDLLIWNASPGALGTLAAYGDSRSHYPISSPVLEAPSAPFTSLAPLPVPSIPQMA 506
K R + W A+ AL A + +SS L + AP T+L P P P P A
Sbjct: 996 KSRQYVPWIANSRALVAAAMATMEETAEKMSSSPLLSSQAPMTTLMPTPPPPAPAPA 1052
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -3
Query: 230 LSARMRSGGTERTSSGTCNNKRSSAQITA--RLQSIFSSKGNLHPLLSKTGIHPAAKASR 57
+ + R+ GT S+ T + S + A R QS+F G+ H + S T P + +
Sbjct: 408 MQLQQRADGTPNGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQ 467
Query: 56 NL*DPNRLPRATMQKV 9
DPN P K+
Sbjct: 468 AHNDPNYTPECIYCKL 483
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 8/46 (17%)
Frame = +3
Query: 393 AYGDSRSHYPISSPV--------LEAPSAPFTSLAPLPVPSIPQMA 506
AY YP PV P AP +AP+PVP P MA
Sbjct: 2 AYNPYNGSYPYPPPVGYVPPPMGYAPPIAPIPMVAPMPVPVAPMMA 47
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 378 LGTLAAYGDSRSHYPISSPVLEAPSAPFTSLAPLPVPSIPQMA 506
L T A S++ YP S+P P P P P P + Q A
Sbjct: 1 LATAAEEYKSQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSA 43
>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
protein BE0003N10.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 146 QLFGQTNAYYYRFQSLYVQYHRNASLH*DSKLSFYGTIFFIN*KNRLHN 292
Q+ Q N + FQ LY+ + +N + ++SF+ + I +N+L +
Sbjct: 375 QILAQNNFEIHIFQKLYIYFKKNCKMPVFQEISFFVALCQILAQNKLQS 423
>AF016448-11|AAB65952.1| 102|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 5 protein.
Length = 102
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 538 CSKRITRSVRGAI*GIDGTGRGARLVKGAEGA 443
C+K + +++GA+ G D G + KGAEG+
Sbjct: 31 CNKELESAMKGAMGGDDLLGSADSIQKGAEGS 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,961,119
Number of Sequences: 27780
Number of extensions: 389679
Number of successful extensions: 1268
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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