Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00973
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   7.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 744 HLHQVVSGSVDNYYWEWIP 688
           +LH VVSG++D  ++E  P
Sbjct: 701 YLHSVVSGALDRLHYETDP 719


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 431 SCIRSALGSFYQPRPSSCSINTSDGTPHTPGNSFTALLYVQATS 562
           S +R+ +      R    S++++   PH PG   T +  +  T+
Sbjct: 622 STLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTITTITTTT 665


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 704 TGSGSRCLQPY 672
           TG+G R LQPY
Sbjct: 102 TGNGGRLLQPY 112



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 542 LYVQATSPALHKLLANIASSE 604
           +Y  A SP  H L  N  SSE
Sbjct: 252 VYGMALSPVTHNLYYNSPSSE 272


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +2

Query: 191 LYVQYHRNASLH*DSKLSFYGTIFFIN 271
           LY+ +H+   +  DS+   YG ++ ++
Sbjct: 251 LYISWHQKELVRRDSRRKNYGGVYHLD 277


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 426 SSPVLEAPSAPFTSLAPLPVPSIPQMAPLTLLVILLLHCYMFKQHHQLYTN 578
           SSP   +PS+ F+S++P  + S        L V   L+ Y+ + ++  + N
Sbjct: 89  SSPSPSSPSSFFSSVSPTSLGSENYTGISDLFVFDDLNDYINRLNYSAFVN 139


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 109 SIHYLAKLVYIQLLRLQEICRILIVFLVQQCKKL 8
           S+HYL  L+YI    L  +   L++++    K L
Sbjct: 46  SLHYLLALLYILFTFLALLGNGLVIWIFCAAKSL 79


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 211 PVVLNVQALEPVIISVRLPK*LHASNLFFHQKVISIHYLAKLVYIQLLRLQEI 53
           PV L VQA++P+  +V +      + + +     S H L    +   LR  E+
Sbjct: 189 PVSLVVQAMDPMNTTVYIADDRGDALIIYQNSDDSFHRLTSKTFDNDLRYSEL 241


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 101 MDGDYLLMKK*IGGVQLFGQTNAYYYRFQSLYVQYHRNAS 220
           +DG+   +K  I G+ L   TN  YY   + +  Y+ N +
Sbjct: 240 IDGESFTLKNGICGMALSPVTNNLYYSPLASHGLYYVNTA 279


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 199  SVPPERILALRQQTQFLWDNIFHQLKKSSSQLLRFYW 309
            +VP   I+A  QQ    W +I+ Q +    Q++  Y+
Sbjct: 917  AVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYY 953


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,781
Number of Sequences: 438
Number of extensions: 4370
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)