Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00971
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    28   5.6  
U20864-12|AAK68358.2|  257|Caenorhabditis elegans Hypothetical p...    28   7.4  
U43283-4|AAU05548.1|  311|Caenorhabditis elegans Dehydrogenases,...    27   9.8  

>U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical
           protein K09E2.1 protein.
          Length = 915

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -2

Query: 239 TTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLR--AASTAFKPI 66
           T+ +VPST   T S SRT   + +T S   +   A   T  R   P L+  +A TAF  +
Sbjct: 587 TSVTVPSTQKATPSPSRTTKKSTTTTSTTATPRQA---TPTRNPLPLLQTMSAITAFPTL 643

Query: 65  TPVEPKIT 42
             +E  +T
Sbjct: 644 LSMEKAVT 651


>Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical
           protein T08D10.2 protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 399 VNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREILLK 518
           VNLN + K +++ LK + L  + A        PS E+LLK
Sbjct: 331 VNLNAERKHLYEVLKTNRLTALLAEQKLKNTPPSDELLLK 370


>AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.2 protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = +1

Query: 40  VVIFGSTGVIGLNAVEAALKKGLE-VRAFVRDPAKLPEH--LKDKVEIV--KGNVLEPDS 204
           V +FG++G +GL  V    K G + +  + +DP  + EH  L +  +++     +++ +S
Sbjct: 62  VTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGELGQVLYFPFELMDEES 121

Query: 205 VHEAVEGTDAVV 240
           + +AV+ ++ V+
Sbjct: 122 IRKAVKYSNVVI 133


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 239 TTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLRAASTAFKPIT 63
           +T ++P T   T   S +  L  ++ +   S +   +RT +R+ +P    AST  +P+T
Sbjct: 80  STTNIPMTTFSTNEASSSTKLLSTSSTAEISST---TRTVSRSIKPETSTASTTIRPLT 135


>U20864-12|AAK68358.2|  257|Caenorhabditis elegans Hypothetical
           protein F32A5.8 protein.
          Length = 257

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 19  VKLKMKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNV 189
           + L  K   I G+T  IG+    A   KG  V  F R+  +  E LK ++E  K +V
Sbjct: 32  IDLSGKTYAITGTTSGIGIETARALALKGAHVVMFNRNIVE-SEKLKKRIEEEKPDV 87


>U43283-4|AAU05548.1|  311|Caenorhabditis elegans Dehydrogenases,
           short chain protein30 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 25  LKMKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEP 198
           +K K VVI G++  +G +      K+G +V    R   KL E  ++  E    N  EP
Sbjct: 45  VKNKVVVITGASSGLGKSLAFELYKRGAQVILLARSTEKLKEICEELKETFPLNQNEP 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,438
Number of Sequences: 27780
Number of extensions: 329511
Number of successful extensions: 972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)