Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00969
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 83 2e-16
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 83 2e-16
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 40 0.003
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 29 3.7
AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical ... 28 8.7
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 83.4 bits (197), Expect = 2e-16
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Frame = +3
Query: 258 ELTGNLENVIVALM-TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYE 434
+ +G+LE I ALM TPL + K+L A+ G+GTDE +IEILC+ + +R I YE
Sbjct: 69 KFSGDLEKAIFALMETPLD-YDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYE 127
Query: 435 QLYGKSLESDLKGDTSGHFKRLCVSCAWPIAMKTRASMKAQLKPMLKHWPPLVKVNGEPT 614
+ YGK+LE+D+ GDTSG F+ L VS + + AQ K +
Sbjct: 128 KEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRL--FADGKAKLA 185
Query: 615 NQSSTPSLSLAPISS---*DRSSPSTKLLTGKDIEDSIKKEFSGSIEKGMLAMPNA 773
+ T L + + + + L G IE SI+KEFSG ++K L + A
Sbjct: 186 KKDGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRA 241
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 QSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTIS 422
+ E +G+L+ IV + F+A++LH ++ G+GT + +I ++ T S + I
Sbjct: 224 EKEFSGDLQKSYLTIVRAASDKQKFFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIK 283
Query: 423 AFYEQLYGKSLESDLKGDTSGHFKRLCVS 509
A +++LY KSL +KGDTSG ++ +S
Sbjct: 284 AEFQELYSKSLADTVKGDTSGAYRDALLS 312
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADI 138
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 145 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
++ A+++V+ QR ++ E +K YGKD+I L
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQAL 66
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 684 KLLTGKDIEDSIKKEFSGSIEKGMLAM 764
KL GKDI ++ K+FSG +EK + A+
Sbjct: 55 KLKYGKDIIQALDKKFSGDLEKAIFAL 81
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 605 GTDESIFNSILITRSYQQLRQIFAEYE 685
GTDE++ IL +R+ QLR I YE
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYE 127
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKVNSPATWK 279
L +MKG GT + +I V+ R V I F+ Y K L +K ++ ++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 83.4 bits (197), Expect = 2e-16
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Frame = +3
Query: 258 ELTGNLENVIVALM-TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYE 434
+ +G+LE I ALM TPL + K+L A+ G+GTDE +IEILC+ + +R I YE
Sbjct: 69 KFSGDLEKAIFALMETPLD-YDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYE 127
Query: 435 QLYGKSLESDLKGDTSGHFKRLCVSCAWPIAMKTRASMKAQLKPMLKHWPPLVKVNGEPT 614
+ YGK+LE+D+ GDTSG F+ L VS + + AQ K +
Sbjct: 128 KEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRL--FADGKAKLA 185
Query: 615 NQSSTPSLSLAPISS---*DRSSPSTKLLTGKDIEDSIKKEFSGSIEKGMLAMPNA 773
+ T L + + + + L G IE SI+KEFSG ++K L + A
Sbjct: 186 KKDGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRA 241
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 QSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTIS 422
+ E +G+L+ IV + F+A++LH ++ G+GT + +I ++ T S + I
Sbjct: 224 EKEFSGDLQKSYLTIVRAASDKQKFFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIK 283
Query: 423 AFYEQLYGKSLESDLKGDTSGHFKRLCVS 509
A +++LY KSL +KGDTSG ++ +S
Sbjct: 284 AEFQELYSKSLADTVKGDTSGAYRDALLS 312
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADI 138
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 145 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
++ A+++V+ QR ++ E +K YGKD+I L
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQAL 66
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 684 KLLTGKDIEDSIKKEFSGSIEKGMLAM 764
KL GKDI ++ K+FSG +EK + A+
Sbjct: 55 KLKYGKDIIQALDKKFSGDLEKAIFAL 81
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 605 GTDESIFNSILITRSYQQLRQIFAEYE 685
GTDE++ IL +R+ QLR I YE
Sbjct: 101 GTDEAVLIEILCSRTVDQLRAIRVTYE 127
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKVNSPATWK 279
L +MKG GT + +I V+ R V I F+ Y K L +K ++ ++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 252 QSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 431
+ EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ + Y
Sbjct: 204 KGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAY 263
Query: 432 EQLYGKSLESDLKGDTSGHFKRLCVS-CA 515
+ L+ K LE DL G+TSGHFKRL VS CA
Sbjct: 264 KMLFKKDLERDLIGETSGHFKRLLVSLCA 292
Score = 61.3 bits (142), Expect = 8e-10
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +1
Query: 61 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 240
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 140 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 199
Query: 241 ISELK 255
I ELK
Sbjct: 200 IKELK 204
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +3
Query: 258 ELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAF 428
E +G++ + ++A++ P ++AK LHD++ G+GT + +I + T + Y + I
Sbjct: 362 EFSGDIRDGLLAVIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNM 421
Query: 429 YEQLYGKSLESDLKGDTSGHFK 494
++ LY SLE+ +KGD SG +K
Sbjct: 422 FQSLYRTSLENMIKGDCSGAYK 443
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 321 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 500
A+ L A+ G+G + +I ILC +N+ + IS ++ +YGK L +LKG+ G F+ L
Sbjct: 155 AEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDL 214
Query: 501 CVS 509
++
Sbjct: 215 ILA 217
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 482 GTLQEIVRVLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQL 661
G + ++ LC RDE+ D + GTDES FN+IL ++++ QL
Sbjct: 281 GHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKRLGTDESTFNAILASQNFSQL 340
Query: 662 RQIFAEYE 685
R +F EY+
Sbjct: 341 RLVFEEYQ 348
Score = 34.7 bits (76), Expect = 0.075
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
L +AM+G GT E +I+++ R Q ++ + +K + KDL +L
Sbjct: 230 LHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDL 275
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 252 QSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 431
+ EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ + Y
Sbjct: 246 KGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAY 305
Query: 432 EQLYGKSLESDLKGDTSGHFKRLCVS-CA 515
+ L+ K LE DL G+TSGHFKRL VS CA
Sbjct: 306 KMLFKKDLERDLIGETSGHFKRLLVSLCA 334
Score = 61.3 bits (142), Expect = 8e-10
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +1
Query: 61 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 240
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 182 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 241
Query: 241 ISELK 255
I ELK
Sbjct: 242 IKELK 246
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +3
Query: 258 ELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAF 428
E +G++ + ++A++ P ++AK LHD++ G+GT + +I + T + Y + I
Sbjct: 404 EFSGDIRDGLLAVIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNM 463
Query: 429 YEQLYGKSLESDLKGDTSGHFK 494
++ LY SLE+ +KGD SG +K
Sbjct: 464 FQSLYRTSLENMIKGDCSGAYK 485
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 321 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 500
A+ L A+ G+G + +I ILC +N+ + IS ++ +YGK L +LKG+ G F+ L
Sbjct: 197 AEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKELKGELHGDFEDL 256
Query: 501 CVS 509
++
Sbjct: 257 ILA 259
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 482 GTLQEIVRVLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQL 661
G + ++ LC RDE+ D + GTDES FN+IL ++++ QL
Sbjct: 323 GHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKRLGTDESTFNAILASQNFSQL 382
Query: 662 RQIFAEYE 685
R +F EY+
Sbjct: 383 RLVFEEYQ 390
Score = 34.7 bits (76), Expect = 0.075
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISEL 252
L +AM+G GT E +I+++ R Q ++ + +K + KDL +L
Sbjct: 272 LHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDL 317
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +3
Query: 264 TGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY 443
+G+ E+ +VAL+ EL+ +V G+GT+E+ +IEIL T +N I Y Y
Sbjct: 69 SGDFEDFLVALLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMTY 128
Query: 444 GKSLESDLKGDTSGHFKRLCV 506
KSLE + DTSG F+RL +
Sbjct: 129 SKSLEDAISADTSGDFRRLLI 149
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 258 ELTGNLENVIVALMTPL---PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAF 428
EL+G+ +N++++L+ P ++A +H A G+GT ++ +I IL + S + I
Sbjct: 223 ELSGDFKNLVLSLIETSRNKPRYFANSIHLATKGMGTRDKDLIRILVSRSENDLVIIEHE 282
Query: 429 YEQLYGKSLESDLKGDTSGHFK 494
++ L+GK L +K + ++
Sbjct: 283 FQTLFGKPLTQLIKEECKAEYR 304
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 372 IIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 509
I+EIL +++N + I Y+ YGK LE ++K SG F+ V+
Sbjct: 33 ILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVA 78
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 696 GKDIEDSIKKEFSGSIEKGMLAM 764
GKD+ED IKK FSG E ++A+
Sbjct: 57 GKDLEDEIKKAFSGDFEDFLVAL 79
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELK 255
L KA++ ++ I+++L QR I +KT YGKDL E+K
Sbjct: 21 LEKALRN--KEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIK 65
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 112 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKVNSPATWK 279
++ A KG GT +K +I +L R + I F+T +GK L +K A ++
Sbjct: 249 SIHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYR 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 115 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAE-TFKTNYGKDLISELKVNSPATWK 279
L +++KG GT+EK +I++L R + +E A+ T+ Y K L + ++ ++
Sbjct: 91 LNRSVKGLGTNEKNLIEILTTR-TNEEIEAAKNTYFMTYSKSLEDAISADTSGDFR 145
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 252 QSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 431
+ E G + AL P P++ A+ ++ ++S D IEI CT S +R + Y
Sbjct: 80 EEECGGFFFEMCQALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTY 139
Query: 432 EQLYGKSLESDLKGDTSG 485
+ Y KSL+ DL G
Sbjct: 140 QIDYRKSLDKDLTVKVEG 157
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/89 (23%), Positives = 36/89 (40%)
Frame = +3
Query: 279 NVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 458
N I + + YAK +H+ V G D+ + R ++ Y + G +
Sbjct: 449 NRIACYLYDAVYLYAKAIHELVEEYGNDDS--YDPTADGKAIIDRIVNKKYRSIQGFDMR 506
Query: 459 SDLKGDTSGHFKRLCVSCAWPIAMKTRAS 545
D +G++ G+F L PI K+ S
Sbjct: 507 IDERGNSKGNFSLLSWQKVAPIMNKSDPS 535
>AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical
protein Y38F1A.6 protein.
Length = 465
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 608 TDESIFNSILITRSYQQLRQIFAEYEAFD 694
TD+++ N+I + Q L+ + EYE FD
Sbjct: 77 TDKNVQNTIAFKNAEQALKMVNIEYEVFD 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,267,776
Number of Sequences: 27780
Number of extensions: 328919
Number of successful extensions: 959
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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