Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00968X
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.2  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   3.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   3.2  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   5.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.8  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 399 HSPRYDYGAETWTLTAGLAHKLRVAQRAMERA 304
           H  +YD G + W  T  L  K RV   A   A
Sbjct: 490 HYVQYDQGEDRWLCTLLLKQKFRVEYSAASDA 521


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 429  MPEDKSL*PVHSPRYDYGAETWTLTAGLAHKLRVAQRAMER 307
            +PEDK    V + RYDY  E          KL+ ++  M R
Sbjct: 939  IPEDKEFFGVKNTRYDYNKEDPQEAGRKLKKLQDSKDKMSR 979


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 351  LPSVSRFPRRSHSGENALVKDFCLQALTY-LHYLSM 455
            +P +S FP  + SGE  +  D C Q +    H L M
Sbjct: 894  IPKISSFPIFTRSGEVKVSLDLCPQRVKLSAHQLEM 929


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 318 AMERAMLGISLRDKIRNEEIRREPKSTT*LSKLAG*SGNGPVTSVEPA 175
           A + A+LG+  +   R +E   +    T +SKL G + N   +SVE A
Sbjct: 158 ASDLALLGLKAKAMKRVKEEHPDWDDNTIVSKLVGYTSNQSHSSVERA 205


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 318 AMERAMLGISLRDKIRNEEIRREPKSTT*LSKLAG*SGNGPVTSVEPA 175
           A + A+LG+  +   R +E   +    T +SKL G + N   +SVE A
Sbjct: 189 ASDLALLGLKAKAMKRVKEEHPDWDDNTIVSKLVGYTSNQSHSSVERA 236


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 70  PPCVLSRQSTWLEDAPRSLY 129
           PP V+S   T+ + APRSL+
Sbjct: 6   PPHVISVLKTYQDKAPRSLH 25


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 384 HSGENALVKDFCLQALTYLH 443
           H+G NA+VK+F  +    +H
Sbjct: 517 HTGRNAMVKEFATKLKHLVH 536


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 384 HSGENALVKDFCLQALTYLH 443
           H+G NA+VK+F  +    +H
Sbjct: 517 HAGRNAMVKEFAAKLKHLVH 536


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 10  RPSPMPST*CGPPPSASNDFPPCV 81
           RPS  P+T   P P A   F P V
Sbjct: 105 RPSQPPTTRFAPEPRAEVKFVPSV 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,202
Number of Sequences: 2352
Number of extensions: 13589
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)