Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00967
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WSZ0 Cluster: Ribonuclease; n=9; Trypanosomatidae|Rep...    34   2.9  
UniRef50_Q5HBU5 Cluster: Putative membrane protein; n=2; Ehrlich...    33   6.7  
UniRef50_Q98RM4 Cluster: Putative uncharacterized protein orf365...    33   6.7  

>UniRef50_Q8WSZ0 Cluster: Ribonuclease; n=9; Trypanosomatidae|Rep:
           Ribonuclease - Leishmania major
          Length = 474

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 21/85 (24%), Positives = 40/85 (47%)
 Frame = -3

Query: 278 VDHFLISSLR*FI*K*CLLVDLSILCINTKNLKTNLYASFPSFNVMLGSRKMALIDKISI 99
           VD F I+S + F+   C   + + L +++K L +++  S   F  +L  +   LI     
Sbjct: 201 VDFFDIASCKKFVVHHCAGDEATSLTLSSKKLDSHVKLSKLPFKKLLSMQTPYLITYHGY 260

Query: 98  DLGGYEIYYYYVNFIIHIYFSKYTI 24
           +  G  +Y++ +    H Y  +Y I
Sbjct: 261 NSAGNYVYFWSIGIANHTYIDEYNI 285


>UniRef50_Q5HBU5 Cluster: Putative membrane protein; n=2; Ehrlichia
           ruminantium|Rep: Putative membrane protein - Ehrlichia
           ruminantium (strain Welgevonden)
          Length = 370

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 191 KNLKTNLYASFPSFNVMLGSRKMALIDKISIDLGGYEIYYYYVNFIIHIYFS 36
           KNLK  L     S+++  G + +  I  ISI++ GYEI   Y+    + Y +
Sbjct: 60  KNLKAILTPKHVSYSIKTGLQTLIDIQNISIEINGYEIDINYIQTKFNEYIN 111


>UniRef50_Q98RM4 Cluster: Putative uncharacterized protein orf365;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf365 - Guillardia theta (Cryptomonas phi)
          Length = 365

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 21/70 (30%), Positives = 39/70 (55%)
 Frame = -3

Query: 221 VDLSILCINTKNLKTNLYASFPSFNVMLGSRKMALIDKISIDLGGYEIYYYYVNFIIHIY 42
           ++ ++L ++TKN KT ++ +  S+   LG   + L+ K+ I    + I + Y  F++H Y
Sbjct: 209 IEQTVLFLDTKNHKT-IFRNISSYKHNLG---VTLVSKLPI----FTILFEYRGFLVHNY 260

Query: 41  FSKYTI*YYK 12
           FS     +YK
Sbjct: 261 FSDNFERFYK 270


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,766,766
Number of Sequences: 1657284
Number of extensions: 11771398
Number of successful extensions: 23416
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23278
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)