Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00965
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.2  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    26   1.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.2  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   8.2  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 490  SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 374
            ++V+AN L V   FLL   K  L + W+  +    S+DE
Sbjct: 927  AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 179 SFELPESNIDCDTSSRSAFSLSNT 108
           +F LP+SN +C T++R   S  NT
Sbjct: 142 NFHLPKSNRNCRTAARRNHSSRNT 165


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 605 PSALPSLRSTCHPLN-QGILVEGSNMLSPCHPERARKRQQ 489
           P+A   + ST  P +   +L+E +NML+  H +   ++QQ
Sbjct: 707 PTATIMMISTAGPHHPHDLLIEENNMLNMTHHQHQHQQQQ 746


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 410 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 502
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 502 RALSGWHGDNMLEPSTKMPW 561
           RAL GWH ++    +   PW
Sbjct: 595 RALKGWHPEDRSARAMLTPW 614


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +3

Query: 390 TKWIPLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLSCPFW 515
           T ++ L+HH + PD+ K+ +     +  T    AT +L+++S  ++
Sbjct: 822 TLFMALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMSPKYY 867


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 40  KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREE 141
           KR I +FE E  +      K+    D LKAER E
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAERVE 352


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 165 WKFETSKYYVTIIDAPG 215
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,007
Number of Sequences: 2352
Number of extensions: 15212
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)