Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00964
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   151   7e-39
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   137   9e-35
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  151 bits (365), Expect = 7e-39
 Identities = 64/85 (75%), Positives = 74/85 (87%)
 Frame = +3

Query: 255 ATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARF 434
           A+DL+EEHR+AYWREDIG+NLHH+HWHLVYPF      IV K+RRGE+F+YMHQQ+IARF
Sbjct: 185 ASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEGAR-EIVDKNRRGEIFYYMHQQIIARF 243

Query: 435 NCERLCNSLKRVKKFSNWREPIPEA 509
           N ERLCN LKRV K SNWREP+PEA
Sbjct: 244 NIERLCNGLKRVVKLSNWREPLPEA 268



 Score = 74.1 bits (174), Expect = 1e-15
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +1

Query: 10  LQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQAR 189
           + DLLS   F R  +NP LF Y +SVAL+HR DT+ + + +F  VFP K++DSQVF +AR
Sbjct: 104 IDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQVFARAR 163

Query: 190 ETA 198
           E A
Sbjct: 164 EEA 166



 Score = 68.1 bits (159), Expect = 6e-14
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = +2

Query: 509 YFPKLDSLTSSRGWPPRQSGMQWQDLNRAAEGLFVTIDEMERWRRNVEEAIATGTVRLPN 688
           YFPKLDSL +SR WP R      +DLNR  + + +++D+M+RWR  + +AI +G VR  N
Sbjct: 269 YFPKLDSLVASRTWPARPVNQVPRDLNREVDQIRLSLDDMDRWRDRIYDAIHSGVVRGDN 328

Query: 689 GQ 694
           GQ
Sbjct: 329 GQ 330


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  137 bits (331), Expect = 9e-35
 Identities = 60/85 (70%), Positives = 73/85 (85%)
 Frame = +3

Query: 255 ATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARF 434
           A+DLEEEHRLAY+RED+GINLHH+HWHLVYPF A    +VAK+RRGELF+YMHQQ+IAR+
Sbjct: 185 ASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEA-AREVVAKNRRGELFYYMHQQIIARY 243

Query: 435 NCERLCNSLKRVKKFSNWREPIPEA 509
           N ERLCN LKR  +F+++ E I EA
Sbjct: 244 NFERLCNKLKRATRFNDFNEAIKEA 268



 Score = 72.5 bits (170), Expect = 3e-15
 Identities = 31/63 (49%), Positives = 46/63 (73%)
 Frame = +1

Query: 10  LQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQAR 189
           + DLLS   +AR  +NP LF+Y  SVA++HR+DT+ + + +F E FP K++DS+VF +AR
Sbjct: 104 VDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAKAR 163

Query: 190 ETA 198
           E A
Sbjct: 164 EEA 166



 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +2

Query: 458 IKKS*KIQQLEGANSGGYFPKLDSLTSSRGWPPRQSGMQWQDLNRAAEGLFVTIDEMERW 637
           +K++ +      A    YFPKLDSL SSR WP R +  + +DLNR  + +   +++++RW
Sbjct: 252 LKRATRFNDFNEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLKRW 311

Query: 638 RRNVEEAIATGTVRLPNGQT 697
              +  AI  G+V    G++
Sbjct: 312 SDRIYAAIHQGSVTDERGRS 331


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 411 HQQVIARFNCERLCNSLKRVKKFSNWREPIPE-ATSLSLTV*LRHVDGPHVSPV 569
           H Q++  F   ++ NS+KR   + N    I +   S  L    +  + PH  P+
Sbjct: 136 HHQLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQKTKSSNRPHQGPL 189


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 650 PRFFSSVPFRQWSQIDLR 597
           PRF S V  + W  +D R
Sbjct: 72  PRFSSGVGRKAWKHLDFR 89


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 650 PRFFSSVPFRQWSQIDLR 597
           PRF S V  + W  +D R
Sbjct: 72  PRFSSGVGRKAWKHLDFR 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,095
Number of Sequences: 336
Number of extensions: 4063
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)