Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00964
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical...    29   3.2  
AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    28   7.4  
Z74042-13|CAE17912.1|  227|Caenorhabditis elegans Hypothetical p...    27   9.8  
U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF038615-1|AAB94149.3|  532|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical
           protein Y56A3A.33 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 171 LGIQEFRGKYFCKILNSDFSGITSVHQCHRVTIVEQLRVQVYSCKG 34
           L +Q    KY CK + S+ SG +S+   H    +   R   + C G
Sbjct: 298 LSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHLFFYCHG 343


>AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical
           protein C09D1.2 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = +3

Query: 291 WREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLC 452
           W    G   ++ +W    PF    L+++  ++RG+   +   ++++++N   +C
Sbjct: 109 WHWMDGSEFNYMNWDRGMPFGRRALAVLVMNKRGKWINHYADKILSQYNAVAVC 162


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 242  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 138
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
            T04A11.3 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 242  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 138
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 962  GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 996


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 242  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 138
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 1   ENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNF 135
           EN L+  +  C +   NL    FN C  +A        K+++K +
Sbjct: 449 ENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEY 493


>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
           protein F54D1.5 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 171 SIHSSS*NRSCYSTRRSTHTYYHSTRLHATDLEEE 275
           ++HS S  RS + +R+STH +  +  L A +L E+
Sbjct: 49  TVHSISSFRSDHLSRKSTHKFLDNPNLFAIELTEK 83


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 12  TRFAIDMRLCTSKPEPSVVQLLLL 83
           TRF I MR  TSK EP++ +LL L
Sbjct: 96  TRFIISMRDFTSKEEPTLSELLNL 119


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 198 CGFTSLSEYLGIQEFRGKYFCKILN---SDFSGITSVHQCHRVTIV 70
           CGFT+L+      E+  K    +LN   + F  + S+HQC R+ I+
Sbjct: 250 CGFTNLAS-----EYNPKDLVLMLNELFARFDKVASIHQCMRIKIL 290


>Z74042-13|CAE17912.1|  227|Caenorhabditis elegans Hypothetical
           protein T11F9.19 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 306 RYLLASTQGGVLLLSPSRVVSWNDNRYAW-NVWWN 205
           RY   + + G+++  PS+ + + +N Y W N ++N
Sbjct: 49  RYFNQTAENGIVIKQPSKPILFANNEYFWDNEYYN 83


>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/34 (29%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
 Frame = +3

Query: 309 INLHHYHWHLVYPFTANDLSIVAKD---RRGELF 401
           +++HH H H++YP   +D+ ++++    R G++F
Sbjct: 105 LSVHHLHMHIIYPI--SDMGLISRKLTFRPGKVF 136


>AF038615-1|AAB94149.3|  532|Caenorhabditis elegans Hypothetical
           protein R02D3.3 protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 43  RVNLNPQLFNYCYSV-ALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARE 192
           R+NLNP++    YS    + +++   V  +   E F  KF  S  F + RE
Sbjct: 197 RLNLNPEIIQAIYSTYPAVQKKNLELVPHEMSEENFWKKFFQSHYFHRERE 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,048,998
Number of Sequences: 27780
Number of extensions: 376296
Number of successful extensions: 962
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)