Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00960
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1200 - 34922073-34922273,34922397-34922469,34922976-349230...    28   7.1  

>02_05_1200 -
           34922073-34922273,34922397-34922469,34922976-34923019,
           34923107-34923183,34923433-34923529,34923668-34924062,
           34926577-34926620,34926702-34926770,34926856-34926956,
           34927689-34927856,34927940-34928141,34928269-34928708,
           34928786-34928884,34929123-34929263
          Length = 716

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 324 IRISTDLERSPHLSTTVICIISSQ*R*WTKLIESIKLEDLAFISFIILKRNMD 166
           +++S D  +S  +    +C++    R W  LIESI      F SF I K+  D
Sbjct: 279 LKVSADSSQSGIIEVMELCLLGLVARQWNSLIESIMSH--TFSSFPISKQYAD 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,799,928
Number of Sequences: 37544
Number of extensions: 297939
Number of successful extensions: 494
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)