Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00959
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open readi...    31   5.5  
AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA seq...    31   5.5  
AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA seq...    31   5.5  

>BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open reading
           frame 182 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 152 KLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVRSCLTMPNLTQ 289
           KL   V ++   +A+   +Q  S P GS  IKN+ R CLT  NL Q
Sbjct: 390 KLQQKVQNSKMSEASG-IQQEDSYPKGSKNIKNSPRKCLTDTNLFQ 434


>AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 436

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 152 KLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVRSCLTMPNLTQ 289
           KL   V ++   +A+   +Q  S P GS  IKN+ R CLT  NL Q
Sbjct: 366 KLQQKVQNSKMSEASG-IQQEDSYPKGSKNIKNSPRKCLTDTNLFQ 410


>AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 360

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 152 KLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVRSCLTMPNLTQ 289
           KL   V ++   +A+   +Q  S P GS  IKN+ R CLT  NL Q
Sbjct: 290 KLQQKVQNSKMSEASG-IQQEDSYPKGSKNIKNSPRKCLTDTNLFQ 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,031,607
Number of Sequences: 237096
Number of extensions: 1948982
Number of successful extensions: 4334
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4330
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)