Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00959
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    35   0.051
AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical ...    29   2.5  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 35.1 bits (77), Expect = 0.051
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +3

Query: 96  LRHFSICLLKQVILANPTENYTIQSFPLTTMMQPKDASNFNPNR 227
           LR+F   +L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIEK--LVDMRQWKEAKNFESSR 472


>AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.5 protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -3

Query: 193 CIIVVSGND*IV*FSVGFARITCFNRHIEKCRNYNRQGC*NLQFHLEFSLRFELLYP 23
           C+I ++ +  IV     F    CFNR++ +C    RQ   + Q H++  +   +  P
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMKEQVETNIFCP 178


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 104 FFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSE 223
           FFN+++E  DSG+ +    N V   DY   TK  E  Q +
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77


>Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical
           protein R07H5.8 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 412 DLYMTLSKD-LDQNG--DRDAYGDEDDHKNSWKFMSRGNRTESISKSLTRNTINVCRWVI 582
           D+  T+ K  LD+ G  + DA   +D H + +  ++R  + E I     +N++ V +W++
Sbjct: 18  DIQTTVEKAFLDKWGLKENDAILCDDKHNDMFTELTRDFKVEYIPGGAAQNSLRVAQWIL 77


>AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical
           protein W02D7.6 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 226 EWFVHHKEHSTELLNNAESNTINFSYKLWTTGHQN--IVQSC 345
           E F HHK+H    LN+ E+  I   ++L   G+ N  IV+ C
Sbjct: 241 EHFGHHKDHRYRFLNDQETAII---FELADAGYSNPEIVKEC 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,276,232
Number of Sequences: 27780
Number of extensions: 345759
Number of successful extensions: 1116
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)