Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00958
(764 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 131 2e-29
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 112 1e-23
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 103 4e-21
UniRef50_P38040 Cluster: Guanine nucleotide-binding protein subu... 91 2e-17
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 81 4e-14
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 74 3e-12
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 73 8e-12
UniRef50_Q8IT61 Cluster: Trimeric G-protein gamma subunit; n=1; ... 69 1e-10
UniRef50_Q9UBI6 Cluster: Guanine nucleotide-binding protein G(I)... 53 7e-06
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 52 2e-05
UniRef50_UPI0000605DBC Cluster: PREDICTED: similar to hCG1650801... 50 5e-05
UniRef50_P59768 Cluster: Guanine nucleotide-binding protein G(I)... 50 6e-05
UniRef50_P50150 Cluster: Guanine nucleotide-binding protein G(I)... 50 8e-05
UniRef50_UPI000155D79E Cluster: PREDICTED: similar to G protein ... 48 3e-04
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 47 6e-04
UniRef50_Q6PA78 Cluster: MGC68728 protein; n=1; Xenopus laevis|R... 46 0.001
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 44 0.005
UniRef50_A7SI97 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.013
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 42 0.022
UniRef50_P61952 Cluster: Guanine nucleotide-binding protein G(I)... 41 0.039
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 40 0.089
UniRef50_A7SSR6 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.089
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 40 0.089
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.63
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 36 1.5
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 34 3.4
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_Q0VZ88 Cluster: Photosynthetic reaction center M subuni... 33 5.9
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 33 5.9
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 131 bits (317), Expect = 2e-29
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +1
Query: 544 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 723
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 724 QPNSAIRKCVRVQ 762
QPNSAIRKCVRVQ
Sbjct: 61 QPNSAIRKCVRVQ 73
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 112 bits (269), Expect = 1e-23
Identities = 49/72 (68%), Positives = 61/72 (84%)
Frame = +1
Query: 547 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 726
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 727 PNSAIRKCVRVQ 762
PNSAIRKCVRVQ
Sbjct: 64 PNSAIRKCVRVQ 75
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 103 bits (248), Expect = 4e-21
Identities = 47/71 (66%), Positives = 54/71 (76%)
Frame = +1
Query: 550 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 729
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 730 NSAIRKCVRVQ 762
NSAI KC RVQ
Sbjct: 133 NSAICKCARVQ 143
>UniRef50_P38040 Cluster: Guanine nucleotide-binding protein subunit
gamma-1 precursor; n=16; Arthropoda|Rep: Guanine
nucleotide-binding protein subunit gamma-1 precursor -
Drosophila melanogaster (Fruit fly)
Length = 70
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = -2
Query: 442 MDMMVSTLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNP 263
MD+M S+LQQQR V EQLRREAAI R +S + + ++KYI EHEQED LL GF+SQKVNP
Sbjct: 1 MDVMSSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNP 60
Query: 262 FREK 251
FREK
Sbjct: 61 FREK 64
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +1
Query: 574 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 753
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 754 RVQ 762
R+Q
Sbjct: 69 RIQ 71
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 553 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 732
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 733 SAIRKCV 753
+A+RKCV
Sbjct: 67 AAVRKCV 73
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +1
Query: 553 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 732
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 733 SAIRKCVRVQ 762
+A+RKCVRVQ
Sbjct: 67 AAVRKCVRVQ 76
>UniRef50_Q8IT61 Cluster: Trimeric G-protein gamma subunit; n=1;
Schistosoma mansoni|Rep: Trimeric G-protein gamma
subunit - Schistosoma mansoni (Blood fluke)
Length = 66
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/60 (51%), Positives = 45/60 (75%)
Frame = -2
Query: 430 VSTLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
+STL QQR + EQLR+EA + R PVS V ++I Y+ ++ +DCL+ GF+S+K NPF+EK
Sbjct: 1 MSTLSQQRKLVEQLRQEANLNRRPVSECVQEMIVYMEQNRDKDCLVSGFASKKDNPFQEK 60
>UniRef50_Q9UBI6 Cluster: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-12 precursor; n=27;
Euteleostomi|Rep: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-12 precursor - Homo sapiens
(Human)
Length = 72
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
+ + Q R +QLR EA+I+RI VS A +D++ Y EH + D LL+G + + NPF++K
Sbjct: 9 NNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE-NPFKDK 66
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/78 (35%), Positives = 39/78 (50%)
Frame = -3
Query: 762 LYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVH 583
L+ DA DGR+ L F + ++LC+R T +R+ L VGFL FV P L +V
Sbjct: 38 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 97
Query: 582 VLTRRSYSSGFTHLDSTT 529
L S ++ HL T
Sbjct: 98 ELPGSSETTTLAHLAGAT 115
>UniRef50_UPI0000605DBC Cluster: PREDICTED: similar to hCG1650801;
n=7; Eutheria|Rep: PREDICTED: similar to hCG1650801 -
Mus musculus
Length = 72
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
S + Q R EQLR EA I RI VS A +D++++ E + D LVG + NPF+EK
Sbjct: 9 SDIGQARRAVEQLRMEAGINRIKVSKAATDLLQFCTEQAKSDPFLVGIPA-ATNPFKEK 66
>UniRef50_P59768 Cluster: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-2 precursor; n=12;
Euteleostomi|Rep: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-2 precursor - Homo sapiens
(Human)
Length = 71
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
+++ Q R + EQL+ EA I RI VS A +D++ Y H +ED LL + + NPFREK
Sbjct: 7 ASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASE-NPFREK 64
>UniRef50_P50150 Cluster: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-4 precursor; n=19;
Mammalia|Rep: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-4 precursor - Homo sapiens
(Human)
Length = 75
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
+++ Q R EQL+ EA + R+ VS A +D++ Y H +ED L++ + + NPFREK
Sbjct: 11 TSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASE-NPFREK 68
>UniRef50_UPI000155D79E Cluster: PREDICTED: similar to G protein
gamma-4 subunit; n=2; Eutheria|Rep: PREDICTED: similar
to G protein gamma-4 subunit - Equus caballus
Length = 255
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
+++ Q R EQL+ EA + R+ VS A +D++ Y H +ED L+ + + NPFREK
Sbjct: 191 TSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLVTPVPASE-NPFREK 248
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 762 LYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVH 583
L+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L +V
Sbjct: 69 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 128
Query: 582 VLTRRSYSSGFTH 544
L S ++ H
Sbjct: 129 ELPGSSETTTLAH 141
>UniRef50_Q6PA78 Cluster: MGC68728 protein; n=1; Xenopus laevis|Rep:
MGC68728 protein - Xenopus laevis (African clawed frog)
Length = 68
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = -2
Query: 427 STLQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFRE 254
S + V EQLR EA+++RI VS A +++ +Y ++ +D LLVG + NPFRE
Sbjct: 5 SNFSTMQRVVEQLRLEASVERIKVSQAAAELQQYCMQNACKDALLVGMPAGS-NPFRE 61
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 658 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
NPF GA AKG+VL+ + + K+PNSA RKCV V+
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVR 117
>UniRef50_A7SI97 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 69
Score = 42.3 bits (95), Expect = 0.013
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = -2
Query: 421 LQQQRAVTEQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREKVHV 242
+ QRAV +QLR E + R+ VS +++K+ H ED L+ G NPFREK
Sbjct: 8 ISTQRAVVDQLRGELKVTRMKVSQTSVELMKFCENHCAEDPLVHGLPPGD-NPFREKTSC 66
Query: 241 LSF 233
F
Sbjct: 67 TLF 69
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 41.5 bits (93), Expect = 0.022
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 634 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVR 55
>UniRef50_P61952 Cluster: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-11 precursor; n=15;
Euteleostomi|Rep: Guanine nucleotide-binding protein
G(I)/G(S)/G(O) subunit gamma-11 precursor - Homo sapiens
(Human)
Length = 73
Score = 40.7 bits (91), Expect = 0.039
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = -2
Query: 397 EQLRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFREK 251
EQLR+E ++R VS +I YI E ED L+ G K NPF+EK
Sbjct: 20 EQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDK-NPFKEK 67
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 39.5 bits (88), Expect = 0.089
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 634 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 98
>UniRef50_A7SSR6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 75
Score = 39.5 bits (88), Expect = 0.089
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 391 LRREAAIKRIPVSVAVSDIIKYINEHEQEDCLLVGFSSQKVNPFRE 254
LR A IKRI VS A +D++ Y EH + D LL S NP++E
Sbjct: 23 LRCHAEIKRIKVSRASTDLMNYCLEHAKNDYLLPQGGSSSGNPYKE 68
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 39.5 bits (88), Expect = 0.089
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 634 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 84
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -1
Query: 758 TRTHLRMAELGCLASTPTFSRTMPFA 681
T TH +AE GCL S P FS+T+P A
Sbjct: 77 TSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 634 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
H+ + P G KG+VL+ + + K+PNSA RKCV V+
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVR 102
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 661 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
P G KG+VL+ + + K+PNSA RKC RV+
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVR 95
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 33.9 bits (74), Expect = 4.4
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 670 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
G SH KGIVL+ V K+PNS RKC V+
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVR 102
>UniRef50_Q0VZ88 Cluster: Photosynthetic reaction center M subunit;
n=2; uncultured bacterium|Rep: Photosynthetic reaction
center M subunit - uncultured bacterium
Length = 76
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 339 SETATDTGILFIAASLRSCSVTARCCCNVDT 431
S +AT T + RSCS TARCC +V T
Sbjct: 9 SRSATGTSTTIPSTVFRSCSSTARCCSSVST 39
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 33.5 bits (73), Expect = 5.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 652 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 762
K P G KG+VL + K+PNSA RKC RV+
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVR 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,934,623
Number of Sequences: 1657284
Number of extensions: 13919921
Number of successful extensions: 32472
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 31574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32460
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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