Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00957
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z93393-15|CAE54926.1|  347|Caenorhabditis elegans Hypothetical p...    38   0.005
AF125459-16|AAD12835.1|  578|Caenorhabditis elegans Hypothetical...    31   0.63 
Z93393-8|CAB07697.2|  189|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z35598-3|CAA84655.3|  525|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 22/81 (27%), Positives = 39/81 (48%)
 Frame = +3

Query: 261 IAYKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLVRHMHFPSVVNAEIKLIAW 440
           + Y  + + ++W  A E C   GA LA   S  E   +Q+LV            +   AW
Sbjct: 195 LEYFFIQREESWYTASEKCIGYGAHLASIHSRLELGFVQRLV-----------PVNQTAW 243

Query: 441 LGINNLENYKVWKNIDGQNIE 503
           +G+N+++   V++N DG  ++
Sbjct: 244 IGVNDIQKENVFRNSDGTPVD 264


>Z93393-15|CAE54926.1|  347|Caenorhabditis elegans Hypothetical
           protein Y48E1B.16 protein.
          Length = 347

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = +3

Query: 258 GIAYKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLVRHMHFPSVVNAEIKLIA 437
           G  YK+  +  NW  A+ +CE+ G+ LA   SE +      L+   +  S+V   ++   
Sbjct: 237 GTKYKIFEERMNWNDAQLHCEELGSHLAYLDSESKNTYATSLIDSQNI-SMVWFGLRTEV 295

Query: 438 WLGINNLENYKVWKNIDGQNIEDTDFT 518
            LG +  + Y  + N+DG  + D + T
Sbjct: 296 GLG-SGSDTYSNFSNLDGCGVVDRNGT 321


>AF125459-16|AAD12835.1|  578|Caenorhabditis elegans Hypothetical
           protein Y25C1A.1 protein.
          Length = 578

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 252 GVGIAYKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLV 386
           G  +A+K+  +A ++ +A  +C  E AKL      +EF +I  L+
Sbjct: 414 GEVVAHKIFMEAASYDQALHWCRNENAKLGGFNDRKEFEAIAALI 458


>Z93393-8|CAB07697.2|  189|Caenorhabditis elegans Hypothetical
           protein Y48E1B.9 protein.
          Length = 189

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = +3

Query: 258 GIAYKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLVRHMHFPSVVNAEIKLIA 437
           G  Y+L  + ++W  A+ +C+  GA LA+  +E +   +  L+         ++E    A
Sbjct: 79  GSKYRLFEERKSWDNAERHCQGFGAHLAIIDNEAKNGFVTNLIN--------SSETSDFA 130

Query: 438 WLGI 449
           W+G+
Sbjct: 131 WIGM 134


>Z35598-3|CAA84655.3|  525|Caenorhabditis elegans Hypothetical
           protein F10F2.5 protein.
          Length = 525

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 201 SYRICAVAAN*WLRARKGVGIAYKLVYQ-AQNWTKAKEYCEQEGAKLAVPKSEEEFASIQ 377
           SY  C      + R  +G    +K V+    N+  A++ C+Q GA L+   S+EEF  + 
Sbjct: 363 SYTKCPDGFVEYYRKNEGKTWCHKYVWDDTANYDNAEQKCQQLGAHLSSFTSDEEFQFLN 422

Query: 378 KLV 386
            ++
Sbjct: 423 DMI 425


>Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical
           protein F31D4.4 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/78 (32%), Positives = 36/78 (46%)
 Frame = +3

Query: 282 QAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLVRHMHFPSVVNAEIKLIAWLGINNLE 461
           Q   +++A EYC Q  A L +  SEEE ASI +       PS  N       W+G+    
Sbjct: 39  QPAEFSEALEYCTQSNASLVIINSEEE-ASIVREFFARENPSFFN-------WIGMRWNA 90

Query: 462 NYKVWKNIDGQNIEDTDF 515
               ++ IDG++   T F
Sbjct: 91  RAADFQWIDGKSKNYTYF 108


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/86 (24%), Positives = 38/86 (44%)
 Frame = +3

Query: 267 YKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFASIQKLVRHMHFPSVVNAEIKLIAWLG 446
           Y  V +   +  AKEYC+  G  LA   +    ++         F S  N +     W+G
Sbjct: 35  YAFVSKKHTYNTAKEYCDSHGYSLATVDNAIT-SNFLASSAATEFGS-NNGQF----WIG 88

Query: 447 INNLENYKVWKNIDGQNIEDTDFTLG 524
           ++  ++Y+++   DG  +  T+F  G
Sbjct: 89  LSRKKDYELFNWDDGTIVSYTNFEAG 114


>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 461 KLQSLEEYRWSKH*RHGFHTWTGQDNGRGYSDDPAEPHCAGVDAINPGLRDWWCHRRQ-- 634
           KL S E    S     GF   TG+ N     +D     C  VDA+  GL D  C R    
Sbjct: 51  KLNSFEWTDGSTTGTDGFIWETGEPNNASSMED-----CIAVDAVTGGLGDQLCSRTDFT 105

Query: 635 PYVCQK 652
            Y C K
Sbjct: 106 GYACGK 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,281,796
Number of Sequences: 27780
Number of extensions: 339897
Number of successful extensions: 972
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)