Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00956
         (639 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636...    30   1.3  
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699...    30   1.3  
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250...    28   7.2  
07_01_1011 + 8571297-8571517,8571943-8572148,8572219-8572334           28   7.2  
02_01_0321 - 2162015-2162134,2162763-2162846,2162931-2163011,216...    27   9.5  

>06_01_0838 -
           6360232-6360460,6360571-6360719,6360825-6360933,
           6361446-6362276,6362865-6362969,6363084-6363180,
           6363303-6363341,6363435-6363477
          Length = 533

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +3

Query: 312 INYLNEVILRRSLSDNSVGSNIYHPNRKNINKTGLRMIV 428
           INY+N+    +S S N VGS    P RKN N T  RM V
Sbjct: 29  INYINQRARLKSASLNCVGS----PPRKNNNATQYRMFV 63


>01_06_0893 -
           32766994-32768841,32769596-32769782,32769860-32769987,
           32770080-32770283,32770373-32770523,32771424-32771533,
           32772534-32772903,32773031-32773189,32773719-32773848,
           32773921-32773989,32774066-32774154,32774319-32774439,
           32775878-32776148
          Length = 1278

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +1

Query: 79  ADSKCTFTSDDVICIDDTVKSPGDTTFSLSDIGPVELVDDQTASQEAKGNLKKFGRGLLE 258
           A S+ T   +    +DD   S   +  + S  GP   +D +T     K  L+K G+ L E
Sbjct: 604 ARSRSTSNMNITEDVDDLPSSTTSSDRNTSGCGPAPKLDQETVLLTLKDRLRKLGQRLHE 663

Query: 259 KKQE 270
           K+ E
Sbjct: 664 KEIE 667


>09_01_0175 -
           2509014-2509064,2509389-2509490,2509603-2509729,
           2509852-2511564,2512335-2512424,2512533-2512801,
           2513118-2513687,2513703-2514065
          Length = 1094

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -3

Query: 613 PDLLQGVQKLRIRAHSVFTPISRHERFDHVATVQEKSMHIFRPRTEN 473
           P +L+ + +  + AH  F  +    +  H +T+QEK+  IFR + EN
Sbjct: 609 PTVLKHMDRDELVAH--FNKMMNQMKRQHDSTLQEKTEEIFRLKREN 653


>07_01_1011 + 8571297-8571517,8571943-8572148,8572219-8572334
          Length = 180

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/61 (21%), Positives = 28/61 (45%)
 Frame = +3

Query: 228 FKEVW*RLIRKKTGVKDLKQQPQECEPLINYLNEVILRRSLSDNSVGSNIYHPNRKNINK 407
           +KE+W    R K  VKD+  Q   C  +    N  + ++++ +   G  ++   +   ++
Sbjct: 117 YKELWWHRERSKPVVKDVNMQGSRCSYICKGKNVSVRKKNVIERHGGRGLFLQIQNKFDQ 176

Query: 408 T 410
           T
Sbjct: 177 T 177


>02_01_0321 -
           2162015-2162134,2162763-2162846,2162931-2163011,
           2163690-2163867,2163946-2164089,2164194-2164240,
           2164520-2164576,2165286-2165408,2165496-2165618,
           2165959-2166072,2166169-2166176,2166272-2166458,
           2174597-2174763,2174924-2175008,2176632-2176820,
           2177727-2177918,2178434-2178634
          Length = 699

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 34  LTKEINSDSYVTIDLADSKCTFTSDDVIC 120
           L +EI S  Y+TID A ++     +D++C
Sbjct: 255 LREEIYSAHYLTIDWAQARSACAKEDLVC 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,856,398
Number of Sequences: 37544
Number of extensions: 276327
Number of successful extensions: 630
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)