Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00956
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069382-1|AAL39527.1|  540|Drosophila melanogaster LD08718p pro...    52   9e-07
AE014297-2754|AAF55738.2|  540|Drosophila melanogaster CG10889-P...    52   9e-07
AE013599-3919|AAF47242.2|  430|Drosophila melanogaster CG13588-P...    48   1e-05
AY048675-1|AAL06601.1|  927|Drosophila melanogaster myosin phosp...    28   9.3  

>AY069382-1|AAL39527.1|  540|Drosophila melanogaster LD08718p
           protein.
          Length = 540

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +3

Query: 351 SDNSVGSNIYHPNRKNINKTGLRMIVIDGSNVAVQHSRYKLFSVRGLKICIDF 509
           S +S+ S +  P   + N +GLR IVIDGSNVA+ H    +FS RG++IC+D+
Sbjct: 112 SPSSMTSTLSSPTGGS-NSSGLRHIVIDGSNVALSHGNNLVFSCRGIRICVDW 163



 Score = 31.5 bits (68), Expect = 1.00
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 506 FFLNRGHV-VKAFVPRYRCK--NGMSTDPKLLDALEKVGNVVYTPSR 637
           +F  RGH  + AFVP +R +  N    D +LL  LE    +V+TPSR
Sbjct: 163 WFRQRGHRDITAFVPNWRKEMANNNIADQELLYELEHERYLVFTPSR 209


>AE014297-2754|AAF55738.2|  540|Drosophila melanogaster CG10889-PA
           protein.
          Length = 540

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +3

Query: 351 SDNSVGSNIYHPNRKNINKTGLRMIVIDGSNVAVQHSRYKLFSVRGLKICIDF 509
           S +S+ S +  P   + N +GLR IVIDGSNVA+ H    +FS RG++IC+D+
Sbjct: 112 SPSSMTSTLSSPTGGS-NSSGLRHIVIDGSNVALSHGNNLVFSCRGIRICVDW 163



 Score = 31.5 bits (68), Expect = 1.00
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 506 FFLNRGHV-VKAFVPRYRCK--NGMSTDPKLLDALEKVGNVVYTPSR 637
           +F  RGH  + AFVP +R +  N    D +LL  LE    +V+TPSR
Sbjct: 163 WFRQRGHRDITAFVPNWRKEMANNNIADQELLYELEHERYLVFTPSR 209


>AE013599-3919|AAF47242.2|  430|Drosophila melanogaster CG13588-PA
           protein.
          Length = 430

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +2

Query: 506 FFLNRGHVVKAFVPRYRCKNGMSTDPKLLDALEKVGNVVYTPSR 637
           +F   GH VKA VP +R  N  S++P+LLD L K G +V+TP +
Sbjct: 307 YFEKMGHEVKAVVPMFRKNNFKSSNPELLDKLHKEGKIVFTPCK 350



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 396 NINKTGLRMIVIDGSNVAVQHSRYKLFSVRGLKICIDF 509
           N  KT  R ++IDGSNVA  H    +FS  G+K C+ +
Sbjct: 270 NKPKTNKRFVIIDGSNVAFAHGNSNVFSSEGIKYCLQY 307


>AY048675-1|AAL06601.1|  927|Drosophila melanogaster myosin
           phosphatase DMBS-L protein.
          Length = 927

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 324 NEVILRRSLSDNSVGSNIYHPNRKNINKTGL 416
           N     +S ++N++ SN YH N  N NK+ L
Sbjct: 433 NAAAANKSNNNNNLSSNNYHNNNNNNNKSDL 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,217,353
Number of Sequences: 53049
Number of extensions: 478494
Number of successful extensions: 1230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)