Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00954X
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81102-6|CAB03207.2|  571|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z81102-4|CAB03204.2|  639|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z69659-7|CAA93488.2|  571|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z69659-6|CAA93486.2|  639|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    27   5.6  
U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family ...    27   5.6  
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    27   5.6  
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    27   5.6  
Z81568-1|CAB04594.1|  681|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z78239-1|CAB01632.1|  232|Caenorhabditis elegans Hypothetical pr...    26   9.8  
AF002679-1|AAB60893.1|  232|Caenorhabditis elegans histone H1-li...    26   9.8  

>Z81102-6|CAB03207.2|  571|Caenorhabditis elegans Hypothetical
           protein F07C6.4c protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = +3

Query: 57  RVDRGLQQGRRLSRSPCKMITSVPLSRSWSTDSCAHENLTCSHARTRCGSPDTTR*SLTY 236
           R+++GLQQ R  +  P     +   S SW+  + +   LT +  ++ C  P T R S+  
Sbjct: 178 RLEQGLQQMRHSASKPDISSLTSDSSNSWTASNSSGPMLTMAMTKS-C--PTTPRGSVPD 234

Query: 237 SLRQSNDHQAS*GTN-HRKISQSSPEAGRQCSHVQRPAGL 353
                +D +     N   ++S+ +P A  + S  QR +G+
Sbjct: 235 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGV 274


>Z81102-4|CAB03204.2|  639|Caenorhabditis elegans Hypothetical
           protein F07C6.4b protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = +3

Query: 57  RVDRGLQQGRRLSRSPCKMITSVPLSRSWSTDSCAHENLTCSHARTRCGSPDTTR*SLTY 236
           R+++GLQQ R  +  P     +   S SW+  + +   LT +  ++ C  P T R S+  
Sbjct: 246 RLEQGLQQMRHSASKPDISSLTSDSSNSWTASNSSGPMLTMAMTKS-C--PTTPRGSVPD 302

Query: 237 SLRQSNDHQAS*GTN-HRKISQSSPEAGRQCSHVQRPAGL 353
                +D +     N   ++S+ +P A  + S  QR +G+
Sbjct: 303 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGV 342


>Z69659-7|CAA93488.2|  571|Caenorhabditis elegans Hypothetical
           protein F07C6.4c protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = +3

Query: 57  RVDRGLQQGRRLSRSPCKMITSVPLSRSWSTDSCAHENLTCSHARTRCGSPDTTR*SLTY 236
           R+++GLQQ R  +  P     +   S SW+  + +   LT +  ++ C  P T R S+  
Sbjct: 178 RLEQGLQQMRHSASKPDISSLTSDSSNSWTASNSSGPMLTMAMTKS-C--PTTPRGSVPD 234

Query: 237 SLRQSNDHQAS*GTN-HRKISQSSPEAGRQCSHVQRPAGL 353
                +D +     N   ++S+ +P A  + S  QR +G+
Sbjct: 235 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGV 274


>Z69659-6|CAA93486.2|  639|Caenorhabditis elegans Hypothetical
           protein F07C6.4b protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = +3

Query: 57  RVDRGLQQGRRLSRSPCKMITSVPLSRSWSTDSCAHENLTCSHARTRCGSPDTTR*SLTY 236
           R+++GLQQ R  +  P     +   S SW+  + +   LT +  ++ C  P T R S+  
Sbjct: 246 RLEQGLQQMRHSASKPDISSLTSDSSNSWTASNSSGPMLTMAMTKS-C--PTTPRGSVPD 302

Query: 237 SLRQSNDHQAS*GTN-HRKISQSSPEAGRQCSHVQRPAGL 353
                +D +     N   ++S+ +P A  + S  QR +G+
Sbjct: 303 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGV 342


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 373 FSPCCLPRPAGRCTCEHWRPASGLDCDIFR 284
           FSP CL   + RC  E+W      DCD  R
Sbjct: 676 FSPPCLK--SVRCVGENWIQEVNFDCDAMR 703


>U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family
           protein 2, isoform c protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 38  WICCSSTCRPGATTRQTTITK 100
           W  CS++C PG   RQ T  +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNR 842


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
           protein 2, isoform a protein.
          Length = 1020

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 38  WICCSSTCRPGATTRQTTITK 100
           W  CS++C PG   RQ T  +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNR 842


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
           protease protein.
          Length = 1020

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 38  WICCSSTCRPGATTRQTTITK 100
           W  CS++C PG   RQ T  +
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNR 842


>Z81568-1|CAB04594.1|  681|Caenorhabditis elegans Hypothetical
           protein K08E3.1 protein.
          Length = 681

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 174 TCSHARTRCGSP 209
           TCSH R  CGSP
Sbjct: 433 TCSHQRPNCGSP 444


>Z78239-1|CAB01632.1|  232|Caenorhabditis elegans Hypothetical
           protein C30G7.1 protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 250 DCRRE*VSDYRVVSGDPHLVRACEHVRFSCAQESVDQLLDNGT 122
           D   E +S   V+ G PH  RA  H  +    +   Q +DNGT
Sbjct: 13  DASTEEISLNYVLLGHPHHERAQHHPSYMDMIKGAIQAIDNGT 55


>AF002679-1|AAB60893.1|  232|Caenorhabditis elegans histone H1-like
           protein protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 250 DCRRE*VSDYRVVSGDPHLVRACEHVRFSCAQESVDQLLDNGT 122
           D   E +S   V+ G PH  RA  H  +    +   Q +DNGT
Sbjct: 13  DASTEEISLNYVLLGHPHHERAQHHPSYMDMIKGAIQAIDNGT 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,374,524
Number of Sequences: 27780
Number of extensions: 220040
Number of successful extensions: 618
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)