Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00952
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 165 3e-40
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 156 1e-37
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 114 6e-25
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 100 2e-20
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 82 4e-15
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 79 3e-14
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 75 3e-13
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 73 1e-12
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 70 1e-11
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 70 2e-11
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 70 2e-11
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 69 4e-11
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 66 1e-10
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 65 3e-10
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 62 4e-09
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 1e-08
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 59 3e-08
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 58 5e-08
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 58 7e-08
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 56 2e-07
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 55 5e-07
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 53 1e-06
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 50 1e-05
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 45 4e-04
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 36 0.18
UniRef50_Q98IL5 Cluster: Mlr2349 protein; n=5; Alphaproteobacter... 33 1.7
UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatu... 33 2.2
UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component... 33 2.2
UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus laev... 32 2.9
UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella ve... 32 3.8
UniRef50_Q4A8Y3 Cluster: Glutamyl-tRNA amidotransferase subunit ... 31 5.1
UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila pseudoobscu... 31 5.1
UniRef50_Q8KAJ1 Cluster: Preprotein translocase SecY subunit; n=... 31 6.7
UniRef50_Q7QTF1 Cluster: GLP_622_16388_13269; n=1; Giardia lambl... 31 6.7
UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:... 31 6.7
UniRef50_Q5CEF1 Cluster: SbmA; n=2; Cryptosporidium|Rep: SbmA - ... 31 6.7
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 31 6.7
UniRef50_O67544 Cluster: Oxaloacetate decarboxylase alpha chain;... 31 8.9
UniRef50_A7P1L6 Cluster: Chromosome chr19 scaffold_4, whole geno... 31 8.9
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 31 8.9
UniRef50_Q47VK1 Cluster: LPS-assembly protein precursor; n=1; Co... 31 8.9
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 165 bits (400), Expect = 3e-40
Identities = 71/85 (83%), Positives = 82/85 (96%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
VLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNL
Sbjct: 44 VLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNL 103
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
DSKLR+DLERLKKIR+HRG+RHYWG
Sbjct: 104 DSKLRDDLERLKKIRSHRGLRHYWG 128
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 156 bits (378), Expect = 1e-37
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
VL+KADIDL KRAGE TE+EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ L
Sbjct: 44 VLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGL 103
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
D+KLREDLERLKKIRAHRG+RH+WG
Sbjct: 104 DNKLREDLERLKKIRAHRGLRHFWG 128
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 114 bits (274), Expect = 6e-25
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
VL+KA IDL K AGE TE++VE++ITIM NPRQY+IP QK + DG+ SQ+ ++ L
Sbjct: 44 VLRKAGIDLTKMAGELTEDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGL 97
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
D+KLRE+LERLKKIRAHRG+RH+WG
Sbjct: 98 DNKLREELERLKKIRAHRGLRHFWG 122
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 99.5 bits (237), Expect = 2e-20
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ K ID + RAG TE++ KI ++++P + IP W LNR D DGK Q+ S+ L
Sbjct: 46 ICKVLKIDPNARAGLLTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTL 105
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
D+K+REDLERLKKI++HRG+RH+WG
Sbjct: 106 DTKMREDLERLKKIKSHRGLRHFWG 130
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 81.8 bits (193), Expect = 4e-15
Identities = 37/88 (42%), Positives = 58/88 (65%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+++ A +D +K AG TEEEV+KI ++++P ++ IP W NR+KD V G+ + S+L
Sbjct: 41 IVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDL 100
Query: 181 DSKLREDLERLKKIRAHRGMRHYWGFVC 264
+ED+ RLK+IR +RG+RH G C
Sbjct: 101 MIIKQEDINRLKRIRCYRGIRHELGLPC 128
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 78.6 bits (185), Expect = 3e-14
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +1
Query: 4 LKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLD 183
LKKA+ID+ KRAGE T E + ++ ++ +P + IP W LNR D GK + + +
Sbjct: 46 LKKANIDVHKRAGELTAAEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIA 105
Query: 184 SKLREDLERLKKIRAHRGMRHY 249
S R DLERL+K R RG+RH+
Sbjct: 106 STHRADLERLRKTRCERGVRHH 127
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 75.4 bits (177), Expect = 3e-13
Identities = 33/85 (38%), Positives = 58/85 (68%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
V+++A +D +RAG T +E E I++I+ NP +++IP W LNR+ D G+ + +++L
Sbjct: 46 VVRRAGLDPLRRAGTLTPKEEELIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDL 105
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
+ +R ++ER+KK+R RG+RH G
Sbjct: 106 SANIRAEIERMKKMRMKRGIRHGLG 130
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 73.3 bits (172), Expect = 1e-12
Identities = 30/85 (35%), Positives = 59/85 (69%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ ++ D+ +DK+ GE EE++EK+ + ++Y +P+W LN +++ V GK L S++L
Sbjct: 63 IAERLDLPIDKKIGELKEEQLEKLREYVE-AKEYDLPEWLLNHRREPVTGKNLNLVSTDL 121
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
+ +++ED+ +KKIR+++G+RH G
Sbjct: 122 EIQVQEDINLMKKIRSYKGIRHEKG 146
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 70.1 bits (164), Expect = 1e-11
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = +1
Query: 127 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWG 255
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWG
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWG 121
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 69.7 bits (163), Expect = 2e-11
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 111
VLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 12 VLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/85 (36%), Positives = 55/85 (64%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
++ K +D D+R GE ++E+++KI +++ + ++P+W NR+KD G L +S+L
Sbjct: 42 IVFKLGLDKDRRLGELSDEDIKKIENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDL 101
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
+R D+ER KKI++ RG+RH G
Sbjct: 102 IFYVRNDIEREKKIKSWRGVRHSLG 126
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 68.5 bits (160), Expect = 4e-11
Identities = 29/88 (32%), Positives = 53/88 (60%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
V++ ++D ++AG +E+V KI +++ +P + IP W NR+KD+ G L ++L
Sbjct: 41 VIRVTELDPKQQAGYLADEDVLKIESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDL 100
Query: 181 DSKLREDLERLKKIRAHRGMRHYWGFVC 264
++ED+ +KKIR ++G+RH C
Sbjct: 101 VLTVQEDITNMKKIRCYKGIRHELRLPC 128
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 66.5 bits (155), Expect = 1e-10
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ K+ IDL KRAGE E+E+++I + +P IP+ ++N Q+DI+DG S L + L
Sbjct: 45 ICKRLGIDLRKRAGEMGEDEMKRISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRL 104
Query: 181 DSKLREDLERLKK---IRAHR 234
D+ LR +ER KK IRA+R
Sbjct: 105 DADLRMMIERGKKNKRIRAYR 125
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 65.3 bits (152), Expect = 3e-10
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ K A +D G EEEV K+ T + +P W LNRQKD+ G+ L +++
Sbjct: 55 IAKGAGVDPSAILGYLPEEEVAKLDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDI 113
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
RED+ LKK+RA+RG+RH G
Sbjct: 114 LLTFREDINNLKKVRAYRGLRHERG 138
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 61.7 bits (143), Expect = 4e-09
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ K ++L KRAGE T+EE KI ++ QY +D+ +GK ++T++ L
Sbjct: 46 ICKVLRLNLTKRAGELTDEEAHKITEVIKMVPQYI---------RDLKNGKNYEVTTNEL 96
Query: 181 DSKLREDLERLKKIRAHRG--MRHYWG 255
++KLREDLER+KKI+ + +RH+WG
Sbjct: 97 ETKLREDLERIKKIKYSQWLCLRHHWG 123
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 1e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 82 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 165
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 58.8 bits (136), Expect = 3e-08
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ ++A +D G E+V+K+ ++ N + +P W LNR++DI G+ L +L
Sbjct: 104 IARQAQVDPHATMGYLPPEQVDKLRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDL 162
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
++ED+ +KKIR+++G+RH G
Sbjct: 163 TMAVKEDINIMKKIRSYKGIRHERG 187
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 58.0 bits (134), Expect = 5e-08
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+L ID + G T+E+V I ++ +P P WFLNR+KD+ G+ + +S++
Sbjct: 86 ILDVLKIDNNSNIGYLTDEQVASIEKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDI 145
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
+ +R D+ER + + +G RH +G
Sbjct: 146 EFTVRNDVERERVSGSWKGYRHMFG 170
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 57.6 bits (133), Expect = 7e-08
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+ +KAD+D G+ ++ +E+++ + N +P+W N QKD G+ + T ++L
Sbjct: 55 IAQKADVDRRAVFGKLDDDVIERVVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDL 113
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
R+D+ R+K I ++RG+RH G
Sbjct: 114 QLTRRQDINRMKMIDSYRGVRHKRG 138
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +1
Query: 19 IDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRE 198
ID ++ G ++EE+EK+ + NP +Y IP W NR++D GK L ++ +
Sbjct: 51 IDKWRKIGSLSDEELEKLEDALRNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEF 110
Query: 199 DLERLKKIRAHRGMRHYWG 255
D++R +I + RG RH G
Sbjct: 111 DIKREMQINSWRGYRHREG 129
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 54.8 bits (126), Expect = 5e-07
Identities = 25/82 (30%), Positives = 48/82 (58%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+LKK D++ + + ++E+++ I + P W +NR+ D + G + S+ L
Sbjct: 53 ILKK---DINYKLYNIEKADLEEVVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVL 109
Query: 181 DSKLREDLERLKKIRAHRGMRH 246
DS L+ED++RL I+ ++G+RH
Sbjct: 110 DSALQEDIKRLVTIKNNKGLRH 131
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 53.2 bits (122), Expect = 1e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 10 KADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSK 189
K +ID G E +V ++ ++ +P +Y +P + LNR+ D+ GK L ++L
Sbjct: 58 KFNIDPSTPIGSLNESQVTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFA 117
Query: 190 LREDLERLKKIRAHRGMRHYWG 255
+R+ + R +R RG RH +G
Sbjct: 118 VRQSINRDVTLRVWRGYRHQYG 139
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +1
Query: 10 KADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSK 189
K ID G EE++ K+ + N + P WFLNR+KD G+ L S L
Sbjct: 43 KLGIDPHAVLGALPEEQINKLDWAVRNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLA 101
Query: 190 LREDLERLKKIRAHRGMRHYWG 255
+ D++ +KK+++ +G+RH G
Sbjct: 102 AKRDVDLMKKLKSWKGIRHSLG 123
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 45.2 bits (102), Expect = 4e-04
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = -1
Query: 258 EAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLILPRIRHD 79
+APV+S SV +NLL+ L++ + +++ G L I I+L + EP+ L R+ HD
Sbjct: 50 DAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSELSRVGHD 109
Query: 78 SDNFFNLFFCAFASTLVKINVGFF 7
F L L +I++ F
Sbjct: 110 HHQRFQLRGGELPGALPEIDLSLF 133
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 36.3 bits (80), Expect = 0.18
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 4 LKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDG 150
+ A + DK + E ++E E++IT++ + KI DW +KD+ DG
Sbjct: 97 IDSAQDEKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q98IL5 Cluster: Mlr2349 protein; n=5;
Alphaproteobacteria|Rep: Mlr2349 protein - Rhizobium
loti (Mesorhizobium loti)
Length = 1180
Score = 33.1 bits (72), Expect = 1.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 112 DWFLNRQKDIVD--GKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGFVCVVSTLRL 285
DWF + ++D G+Y Q S D E L L ++ HRG R G + +S L
Sbjct: 169 DWFFSENAVLIDTAGRYVQ-QESQPDVDAAEWLGFLDLLKKHRGRRALNGVIVALSIDAL 227
Query: 286 LAGEEELLVYQRR 324
G+E + + R+
Sbjct: 228 SEGDEAIKAHGRK 240
>UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatus
Ellin6076|Rep: Trigger factor - Solibacter usitatus
(strain Ellin6076)
Length = 422
Score = 32.7 bits (71), Expect = 2.2
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 31 KRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQ-KDIVDGKYSQLTSSNLD-SKLREDL 204
+R E +E KI+ + + ++ +P+ F+ RQ ++ V+ + +D SKL+ D
Sbjct: 272 QRQYEAQQEAKNKIVDKLVDAHEFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDW 331
Query: 205 ERLKKIRAHRGMR 243
E++K+ + + R
Sbjct: 332 EKVKEAQREKATR 344
>UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component
NapD; n=1; Sulfurovum sp. NBC37-1|Rep: Periplasmic
nitrate reductase component NapD - Sulfurovum sp.
(strain NBC37-1)
Length = 119
Score = 32.7 bits (71), Expect = 2.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 40 GECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSN-LDSKLREDLERLK 216
G+ EEE+EK++ I P D + Q+D +D + +L N + L +D ++
Sbjct: 46 GKGVEEEIEKLVKIQRLPNVI-AADMMMTYQEDELDAEVKRLEEENPVPDVLNDDDIDVR 104
Query: 217 KIRAHRGMRH 246
+ H +RH
Sbjct: 105 DVEYHGDLRH 114
>UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus
laevis|Rep: LOC100037042 protein - Xenopus laevis
(African clawed frog)
Length = 384
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 73 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLK 216
+ I ++ KIPD LN + V +S+ + N +S+L+ D +R+K
Sbjct: 6 VGIHKEEQEQKIPDPLLNGDAEDVPQHFSETPTCNTESRLQADQQRIK 53
>UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 31.9 bits (69), Expect = 3.8
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 43 ECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTS--SNLDSKLREDLERLK 216
E TE V K + I N + Y+ DW LN V+G + D KL LER K
Sbjct: 31 ELTETPVRKAMFIQVN-QTYEETDWILNLPD--VNGTLEGIVGWVDLQDPKLESILERYK 87
Query: 217 KIRAHRGMRH 246
K RG+R+
Sbjct: 88 KFPKFRGVRN 97
>UniRef50_Q4A8Y3 Cluster: Glutamyl-tRNA amidotransferase subunit B;
n=3; Mycoplasma hyopneumoniae|Rep: Glutamyl-tRNA
amidotransferase subunit B - Mycoplasma hyopneumoniae
(strain 7448)
Length = 466
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 96 PRIRHDSDNFFNLFFCAFASTLVKIN 19
P +R +++ FFNLF A+ TL KIN
Sbjct: 28 PNLRGEANQFFNLFDLAYLGTLPKIN 53
>UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1;
Babesia sp. WA1|Rep: Putative uncharacterized protein -
Babesia sp. WA1
Length = 954
Score = 31.5 bits (68), Expect = 5.1
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 43 ECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDL 204
E TE+ + ++ PR YK WF NR ++ + ++ +T L + + D+
Sbjct: 163 ESTEDAIPPKFNVLCMPRSYKALKWFANRGINMDNEEFGSVTYDFLKNYIPPDI 216
>UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila
pseudoobscura|Rep: GA15861-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 354
Score = 31.5 bits (68), Expect = 5.1
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 61 VEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 234
++ I ++ + ++ I WF+N K + + K + N SKL + E+LK + HR
Sbjct: 185 MKSIEVLICDEEEFSI--WFMNNLKHLKNLKQLTIRGKNYPSKLLDIAEKLKAVGRHR 240
>UniRef50_Q8KAJ1 Cluster: Preprotein translocase SecY subunit; n=11;
Bacteroidetes/Chlorobi group|Rep: Preprotein translocase
SecY subunit - Chlorobium tepidum
Length = 441
Score = 31.1 bits (67), Expect = 6.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 34 RAGECTEEEVEKIITIMSNPRQYKIP-----DWFLNRQKDIVDGKYSQLTSSNLDSKLRE 198
R G+ TEE ++ I+T ++ P + FL + ++ G + ++L +
Sbjct: 352 RPGKNTEEFIDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFFGGTSLLIVVSV 411
Query: 199 DLERLKKIRAHRGMRHYWGFV 261
L+ L+++ +H MRHY GF+
Sbjct: 412 GLDTLQQVESHLMMRHYDGFM 432
>UniRef50_Q7QTF1 Cluster: GLP_622_16388_13269; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_622_16388_13269 - Giardia lamblia
ATCC 50803
Length = 1039
Score = 31.1 bits (67), Expect = 6.7
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 55 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 234
EE+++++++ N R+Y IP NR ++ S+L ++S+ D I A+
Sbjct: 519 EEIQRLLSL--NIREY-IPTETFNRTVKEINASLSELYE-RIESR---DPSTFCTILANM 571
Query: 235 G--MRHYWGFVCVVSTLRLLAGEEELLVY 315
++ + ++C+VS LR+ G E LLV+
Sbjct: 572 NDVLKASYKWICIVSVLRIRVGGETLLVH 600
>UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:
ENSANGP00000008877 - Anopheles gambiae str. PEST
Length = 887
Score = 31.1 bits (67), Expect = 6.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 82 MSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 252
M P + + +W +K VD ++L +L E LER++ RA ++ YW
Sbjct: 214 MLYPVKRTVYNWDFRMKKKDVDDAAAELAQVEAAKRLEEALERIRLNRAAAKIQRYW 270
>UniRef50_Q5CEF1 Cluster: SbmA; n=2; Cryptosporidium|Rep: SbmA -
Cryptosporidium hominis
Length = 280
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 100 YKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGFVCVVSTL 279
YK+P QK ++ KY ++ + N DS+ D + L+ I H +Y F C
Sbjct: 134 YKLPYLHFENQK--LEAKYRKILALNEDSEHNIDSKELESIYEHLTRNYYSTFKCTFFFQ 191
Query: 280 RLLAGEEELLVY 315
L E+ +
Sbjct: 192 YLYVSANEIAFF 203
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 31.1 bits (67), Expect = 6.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 7 KKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQK 135
+K ++D K C ++E+EK + SNP + W + +K
Sbjct: 539 QKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
>UniRef50_O67544 Cluster: Oxaloacetate decarboxylase alpha chain;
n=5; cellular organisms|Rep: Oxaloacetate decarboxylase
alpha chain - Aquifex aeolicus
Length = 620
Score = 30.7 bits (66), Expect = 8.9
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +1
Query: 10 KADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSK 189
K + +L K+AG+ E +K P + ++ SQL NL+ K
Sbjct: 258 KVNTELYKKAGDIMREVRKKYKKYDVLPPYPDVSVLIHQIPGGMISNFISQLREQNLEDK 317
Query: 190 LREDLERLKKIRAHRG 237
L E LE +K++R G
Sbjct: 318 LEEVLEEVKRVREDLG 333
>UniRef50_A7P1L6 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 769
Score = 30.7 bits (66), Expect = 8.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 25 LDKRA-GECTEEEVEKIITIMSNPRQ-YKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRE 198
+DK A G TEEEV++IIT+ +Q +K+ L K G L+ + R
Sbjct: 193 VDKDADGRITEEEVKEIITLKCRIQQVHKLEMVLLEASKQTTRGDSKNLSQLLSEQLRRP 252
Query: 199 DLERLKKIRAHRGMRH 246
LE IR +G ++
Sbjct: 253 ALENNPLIRCCQGTKY 268
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 30.7 bits (66), Expect = 8.9
Identities = 28/85 (32%), Positives = 43/85 (50%)
Frame = +1
Query: 1 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
+LK ID +KR G+ T+EE+ KI +Y I D F V+G+ L
Sbjct: 33 ILKNTGIDPEKRVGDLTDEEISKIT-------KY-IQDHFK------VEGE--------L 70
Query: 181 DSKLREDLERLKKIRAHRGMRHYWG 255
S++ ++ RL +I +RG+RH G
Sbjct: 71 RSEVERNIRRLIEIGCYRGIRHKLG 95
>UniRef50_Q47VK1 Cluster: LPS-assembly protein precursor; n=1;
Colwellia psychrerythraea 34H|Rep: LPS-assembly protein
precursor - Colwellia psychrerythraea (strain 34H / ATCC
BAA-681) (Vibriopsychroerythus)
Length = 771
Score = 30.7 bits (66), Expect = 8.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 PDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLER-LKKIRAHRGM 240
P WFLN + ++ Y Q + + S L E ++R L K+R H G+
Sbjct: 437 PSWFLNSEVKLMHTYYQQ-DNISAGSSLEETVDRTLPKVRIHAGV 480
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,990,493
Number of Sequences: 1657284
Number of extensions: 5582021
Number of successful extensions: 17248
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 16962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17242
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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