Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00952
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   140   4e-34
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    26   7.3  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    26   7.3  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  140 bits (338), Expect = 4e-34
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = +1

Query: 7   KKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDS 186
           +KAD+D++KRAGE TEE+ +KI+TIM NP QYKIP+WFLNRQKDI DGK  QL S+ +D+
Sbjct: 46  RKADVDVNKRAGELTEEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDN 105

Query: 187 KLREDLERLKKIRAHRGMRHYWG 255
           KLREDLER+KKIR HRG+RHYWG
Sbjct: 106 KLREDLERMKKIRLHRGLRHYWG 128


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 88  NPRQYKIPDWFLNRQKDIVDGKYS-QLTSSNLDSKLREDL 204
           NP  YK+ D++ N+  +++  K + +L S++L  K +++L
Sbjct: 40  NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79


>U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical
           protein C09B9.7 protein.
          Length = 913

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  TIMSNPRQYKIPDWFLNRQK-DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 249
           +I  NP    + +  LNR      D KY    SS+++  ++ DLE+LKKI   + ++ Y
Sbjct: 111 SIRDNPVSQSLANILLNRDTAPYYDYKY---LSSDIELMVK-DLEKLKKINKEKTLKMY 165


>AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical
           protein M01B12.4b protein.
          Length = 644

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 1   VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
           VLK+  I L KR  +  E+E  K +T+                 K    G  +  T + L
Sbjct: 45  VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104

Query: 181 DSKLREDLERLKKIR 225
           D+  + + +  KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119


>AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical
           protein M01B12.4c protein.
          Length = 678

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 1   VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
           VLK+  I L KR  +  E+E  K +T+                 K    G  +  T + L
Sbjct: 45  VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104

Query: 181 DSKLREDLERLKKIR 225
           D+  + + +  KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119


>AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical
           protein M01B12.4a protein.
          Length = 634

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +1

Query: 1   VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 180
           VLK+  I L KR  +  E+E  K +T+                 K    G  +  T + L
Sbjct: 45  VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104

Query: 181 DSKLREDLERLKKIR 225
           D+  + + +  KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 103 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 234
           + PD++ N   D+V+G +     S+ D+    D E  +K  A R
Sbjct: 730 RAPDFYTNNAIDLVEGHWHAADESDHDNLKASDEENEQKSAAAR 773


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 103 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 234
           + PD++ N   D+V+G +     S+ D+    D E  +K  A R
Sbjct: 730 RAPDFYTNNAIDLVEGHWHAADESDHDNLKASDEENEQKSAAAR 773


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,214,862
Number of Sequences: 27780
Number of extensions: 134554
Number of successful extensions: 469
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)