Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00950
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 163 7e-40
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 163 7e-40
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 163 7e-40
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 163 7e-40
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 130 4e-30
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 67 5e-11
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 4.8
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 4.8
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 4.8
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 4.8
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 163 bits (395), Expect = 7e-40
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
D+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
SWGSEC TRKTRIIDVVYNASNNEL
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNEL 90
Score = 130 bits (314), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
R++ AK+ LEEQF G+LLAC+
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACI 175
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 163 bits (395), Expect = 7e-40
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
D+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
SWGSEC TRKTRIIDVVYNASNNEL
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNEL 90
Score = 130 bits (314), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
R++ AK+ LEEQF G+LLAC+
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACI 175
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 163 bits (395), Expect = 7e-40
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
D+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
SWGSEC TRKTRIIDVVYNASNNEL
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNEL 90
Score = 130 bits (314), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
R++ AK+ LEEQF G+LLAC+
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACI 175
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 163 bits (395), Expect = 7e-40
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
D+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
SWGSEC TRKTRIIDVVYNASNNEL
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNEL 90
Score = 130 bits (314), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
R++ AK+ LEEQF G+LLAC+
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACI 175
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 130 bits (314), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 70 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 129
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
R++ AK+ LEEQF G+LLAC+
Sbjct: 130 DERKKNAKISSLLEEQFQQGKLLACI 155
Score = 102 bits (245), Expect = 1e-21
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
D+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------- 51
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
C TRKTRIIDVVYNASNNEL
Sbjct: 52 -----C-TRKTRIIDVVYNASNNEL 70
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 156 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 67.3 bits (157), Expect = 5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 48 ASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 80
Score = 57.2 bits (132), Expect = 5e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 369 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACV 509
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 47
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 494
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 494
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 494
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 494
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,482,887
Number of Sequences: 237096
Number of extensions: 1842817
Number of successful extensions: 4415
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4409
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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