Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00950
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 176 1e-46
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 1.5
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 1.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 6.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 6.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 6.0
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 7.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.9
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 7.9
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 7.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.9
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 7.9
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.9
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 7.9
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 176 bits (429), Expect = 1e-46
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +1
Query: 1 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 180
DHWHKRRATGGKR PIRKKRK+ELGRPAANT+LGPQRIH+VR+RGGN KYRALRLDTGNF
Sbjct: 6 DHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNF 65
Query: 181 SWGSECSTRKTRIIDVVYNASNNEL 255
SWGSEC+TRKTRIIDVVYNASNNEL
Sbjct: 66 SWGSECTTRKTRIIDVVYNASNNEL 90
Score = 146 bits (354), Expect = 2e-37
Identities = 67/86 (77%), Positives = 75/86 (87%)
Frame = +3
Query: 252 IVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 431
+VRTKTLVKNAIV +DATPFRQWYE HY LPLGRK+GAKLTEAEE ++NKKRS+K KY
Sbjct: 90 LVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAKY 149
Query: 432 LARQRLAKVEGALEEQFHTGRLLACV 509
ARQR AKVE ALEEQF TGR+LAC+
Sbjct: 150 KARQRFAKVEPALEEQFATGRVLACI 175
Score = 66.5 bits (155), Expect = 2e-13
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +2
Query: 509 ASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 607
+SRPGQCGR DGYILEGKELEFY+R+IKSK+AK
Sbjct: 176 SSRPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 293 YNNCILDKGLCT 258
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 293 YNNCILDKGLCT 258
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 275 DKGLCTHNSLLDALYTT 225
D L +HN+LL+ +Y+T
Sbjct: 395 DNALASHNNLLNNVYST 411
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 293 YNNCILDKGLCTH 255
Y C+LD+G CT+
Sbjct: 43 YIKCMLDEGPCTN 55
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = -2
Query: 347 KRQRIMRLIPLPEWSCIYYNNCILDKGLCTHNSLLDALYTTSMIRVLRVEHSDPQEK 177
K Q + L+ LP W CIL + +L + ++R + P E+
Sbjct: 18 KEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQISSLIIPGNVNMIRTHSTXPXEE 74
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 293 YNNCILDKGLCTH 255
Y C+LD+G CT+
Sbjct: 43 YIKCMLDEGPCTN 55
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 326 LIPLPEWSCIYYNNC 282
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 293 YNNCILDKGLCTHNSLLDALYT 228
Y I ++ C+ NSL+ +YT
Sbjct: 36 YRCVICERVYCSRNSLMTHIYT 57
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,435
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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