BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00948
(459 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 25 0.26
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 23 1.0
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 2.4
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 2.4
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 22 2.4
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 5.5
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 21 7.3
EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport pe... 21 7.3
EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport pe... 21 7.3
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 7.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 20 9.6
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 20 9.6
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 20 9.6
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 20 9.6
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 25.4 bits (53), Expect = 0.26
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 235 KEKQKSIENIEKDNEDVEMSSDDENVVVDSEG-GKKRVFNTKTLKDQ--NGQYPVW 393
++K++ E+ +KD +E +DE+ E KK+ K +D+ N P+W
Sbjct: 231 EKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIW 286
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 23.4 bits (48), Expect = 1.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 86 RKCRAIKRERYAVKELARLKKMLGVKDEEKPAG 184
RK I E +L ++K ++ V+DE KP G
Sbjct: 150 RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 307 NVVVDSEGGKKRVFNT 354
N+ V S+G K FNT
Sbjct: 434 NIEVQSQGSSKNTFNT 449
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 2.4
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 7/33 (21%)
Frame = +1
Query: 250 SIENI--EKDNEDVE-----MSSDDENVVVDSE 327
S+E++ +K++E+VE DDEN+ VD +
Sbjct: 15 SVESLLSKKEDEEVEHRLSDRDDDDENITVDDD 47
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 22.2 bits (45), Expect = 2.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 291 HFDVFIVLFDVFY 253
H ++I+ FD+FY
Sbjct: 174 HTSIYIIFFDMFY 186
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 29 SKYFCF*NAMAKSIRSRWKR 88
SKY F N M +W+R
Sbjct: 697 SKYLDFINVMTYDFHGQWER 716
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 20.6 bits (41), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 195 ITSLPAGFSSSLTPSIFFNRA 133
ITS PAG S + P F R+
Sbjct: 27 ITSSPAGRSPAFLPHHFTKRS 47
>EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport
peptide isoform B protein.
Length = 120
Score = 20.6 bits (41), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 195 ITSLPAGFSSSLTPSIFFNRA 133
ITS PAG S + P F R+
Sbjct: 27 ITSSPAGRSPAFLPHHFTKRS 47
>EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport
peptide isoform A protein.
Length = 140
Score = 20.6 bits (41), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 195 ITSLPAGFSSSLTPSIFFNRA 133
ITS PAG S + P F R+
Sbjct: 27 ITSSPAGRSPAFLPHHFTKRS 47
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 409 SYVCATKPGTVRSD 368
SY+C KPG S+
Sbjct: 44 SYICTCKPGFTGSN 57
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 20.2 bits (40), Expect = 9.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -3
Query: 328 LHYRPQRFHHPNSFRR 281
L Y+P+ PN++ R
Sbjct: 499 LFYKPEDIFRPNTYNR 514
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 268 FRCFLYFFAFL*IARVQKYNLLRFHNLT 185
F+ ++ FF V K L+R+ NLT
Sbjct: 153 FQMYVLFFVNFAFFVVVKMLLVRYRNLT 180
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 268 FRCFLYFFAFL*IARVQKYNLLRFHNLT 185
F+ ++ FF V K L+R+ NLT
Sbjct: 153 FQMYVLFFVNFAFFVVVKMLLVRYRNLT 180
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = -3
Query: 214 YNLLRFHNLTSSWFLFIFDAEHFFQSR*FFY 122
Y+LLR + SW+ + + + +R +++
Sbjct: 27 YSLLRVKRMMRSWYYLLTNLTYNNTNRKYYW 57
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,459
Number of Sequences: 336
Number of extensions: 1866
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -