Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00948
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 30 0.15
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 29 0.26
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 28 0.79
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 0.79
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.79
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 27 1.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 1.8
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 27 1.8
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 26 2.4
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 2.4
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 2.4
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 26 3.2
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 25 5.6
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 5.6
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 25 5.6
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 25 5.6
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 25 5.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 7.3
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 25 7.3
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 7.3
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.3
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 7.3
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 25 7.3
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 7.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 9.7
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 24 9.7
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 9.7
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 24 9.7
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 24 9.7
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 30.3 bits (65), Expect = 0.15
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 264 DVFYTFLLFF-KSPASRNITCSDSITSLPAGFSSSLTPSIFFNRANS 127
D FY FL F SP N+ CS +TSL S TP + A S
Sbjct: 386 DSFYDFLQFMTSSPLGGNMACSAGLTSLLGYHLSVKTPQATYVVARS 432
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.26
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2
Query: 125 KELARLKKMLGVKDEEKPAGSEV 193
+E+A L+KMLG+K ++K A S++
Sbjct: 115 REIAHLEKMLGIKSKDKSAHSKI 137
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.9 bits (59), Expect = 0.79
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 217 SGRGRFKEKQKSIENIEKDNEDVEMSSDDENVVVDSEG-GKKRVFNTKTLKDQ 372
SG+ + K+++K ++++ D +S DDE + D+ KKR N + + ++
Sbjct: 939 SGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKTKKRRVNRRVISEE 991
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 0.79
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 237 FKSPASRNITCSDS-ITSLPAGFSSSLTPSIFFNRANSFTAYRS 109
F++P + I+ +S ++S P +SSLTP N A ++A+RS
Sbjct: 174 FQTPRAAAISKRESGVSSEPRARTSSLTPGNTPNSAKQWSAFRS 217
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 0.79
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 231 SPASRNITCSDSITSLPAGFSSSLTPSIFFNRANS--FTAYRSRLIALH 91
+PAS T + S++S + SSS TPS + A S + S LIAL+
Sbjct: 749 TPASSTSTTTSSVSSRQSSSSSSFTPSSAISTAKSSFVLSTLSILIALY 797
>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 437
Score = 27.1 bits (57), Expect = 1.4
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 265 EKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 375
+ +N D E DD++++ + +N+K+LK++N
Sbjct: 9 DDENYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEEN 45
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 228 PASRNITCSDSITSLPAGFSSSLTPSIF 145
P S + S SIT++ +G SSS PS F
Sbjct: 546 PTSSSSDFSSSITTISSGISSSSIPSTF 573
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 340 FSCRLHYRPQRFHHPNSFRRLHCPF 266
F C LH + + HP S R HCPF
Sbjct: 418 FDCGLH-KCSKTCHPISETRAHCPF 441
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 279 FIVLFDVFYTFLLFFKSPASRNITCSDSITSLPAGFSSSLTP 154
F+ + D+ + L + P R+ + S+ +TS+ SSSL+P
Sbjct: 344 FVRIIDLIFVQLSTW--PTKRSFSMSEIVTSMQMSISSSLSP 383
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 2.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 217 SGRGRFKEKQKSIENIEKDNEDVEMSSDDENVVVDSEGGK 336
+ + R E+ S+E E +SD+EN D EGG+
Sbjct: 13 TNKKRNPEEADSLEPASSRRRLAEENSDEENEEFDEEGGR 52
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 259 NIEKDNEDVEMSSDDENVVVDSEGGKK 339
++ + EDVEM S+D++ +SE G K
Sbjct: 1318 SMSDNEEDVEMRSEDQSDTSESEVGSK 1344
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 2.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 80 WKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVME 199
WK K IK E V+++ LKK ++ E P S + +
Sbjct: 211 WKNKVEQIKNESRLVRKIQELKK--SYQESEHPIVSSIRD 248
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 3.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 267 FDVFYTFLLFFKSPASRNITCSDSITSLPAGFSSSLTPSIFF 142
+++F +FL + + P TC DS+ S T S +F
Sbjct: 436 WNIFVSFLRYSRLPGRDAFTCLDSVESKKVKDQRDKTESFWF 477
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.0 bits (52), Expect = 5.6
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -1
Query: 264 DVFYTFLLFFKSPASRNITCSDSIT----SLPAGFSSSLTPSIFFN 139
D+ F F + P S+SIT ++ GF L P IFFN
Sbjct: 250 DIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFN 295
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 25.0 bits (52), Expect = 5.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 229 RFKEKQKSIENIEKDNEDVEMSSDDENVVVDSEGGKK 339
RF+ ++ N+ N ++S+ E+ V S GG++
Sbjct: 143 RFRSSIAALRNLNTQNNQSTLASNHEDENVSSSGGQE 179
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.0 bits (52), Expect = 5.6
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 369 IFQGFRIKNS----FLAAFTIDHNVFIIRTHFDVFIVLFDVFYTFLLFFKSPASRNIT 208
I +G+R S F + + + F I TH FIV F V F S S N++
Sbjct: 184 IIRGYRFYTSKRKCFRSILSWHNETFNIWTHLSAFIVFFAVLAYFYPSSSSWVSSNVS 241
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 223 RGRFKEKQKSIENIEKDNEDVEMSSDD 303
+ RFK K+K + E ++E +++++DD
Sbjct: 318 KSRFKRKKKKEQPEEAEDEYIDVNTDD 344
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 235 KEKQKSIENIEKDNEDVEMSSDDENVVV 318
++K SI +I + ED+E SD+EN +V
Sbjct: 34 RDKNASITDIHE--EDIEAFSDEENKIV 59
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 85 LPSAPNRFRHCVLKTK 38
LPS PNR H VL K
Sbjct: 598 LPSRPNRMNHSVLNEK 613
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 74 SRWKRKCRAIKRERYAV 124
SRWK+K + +K E Y V
Sbjct: 119 SRWKKKIQLLKSEDYTV 135
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 171 RNQLEVRLWNLSKL 212
RNQ ++ +WNLSKL
Sbjct: 325 RNQPDIIIWNLSKL 338
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 24.6 bits (51), Expect = 7.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 231 SPASRNITCSDSITSLPAGFSSSLTPSIFFNRANSFTA 118
+P+S + T S S +S SSS+T SI + ++S ++
Sbjct: 148 TPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSS 185
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 223 RGRFKEKQKSIENIEKDNEDVEMSSDDENVVVDS 324
+ K + KS E +E DN+++ + ENV DS
Sbjct: 1153 KANIKTEMKS-ETVEGDNKELRETMKGENVQTDS 1185
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 24.6 bits (51), Expect = 7.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 232 FKEKQKSIENIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWL 396
F + KS+E + K+ E D V + K+R+ K LKD Y WL
Sbjct: 270 FMPRSKSME-LYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWL 323
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 235 KEKQKSIENIEKDNEDVEMSSDDENVVVDSEGGKKR 342
+E ++ + E++ ED E +DE +S GG+++
Sbjct: 101 EENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRK 136
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.2 bits (50), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 174 FSSSLTPSIFFNRANSFTAYRSRLIALHF 88
F++ P ++ R + A+R+R + +HF
Sbjct: 1009 FATQNPPGVYAGRKHLSRAFRNRFLEIHF 1037
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 24.2 bits (50), Expect = 9.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 238 EKQKSIENIEKDNEDVEMSSDDENVVVDSEGGKKRV 345
EK+K+ E +KD + + + D+N + + E G+K V
Sbjct: 271 EKEKAKEK-QKDKDQEQDTVSDKNQIDEIEKGQKEV 305
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 429 VFIYFGDLTFVQPNRVLSVLIFQGFRIKNS 340
+ I++ FVQP ++ L+F G I NS
Sbjct: 365 ITIHYTGKEFVQPYFIIYTLVFFGSSIANS 394
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 24.2 bits (50), Expect = 9.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 226 GRFKEKQKSIENIEKDNEDV-EMSSDDENVVVDSE 327
G F E ++ + +E+D E+V + S D+E D E
Sbjct: 420 GEFSEAREDLAALERDYEEVGQDSMDNEMYEADEE 454
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 232 FKEKQKSIENIEKDNEDVEMSSDDENVVVDS 324
F+E +++ EN + +NE +E S V DS
Sbjct: 295 FREDKQNDENEKNENEPIEASESAPTNVSDS 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,664,707
Number of Sequences: 5004
Number of extensions: 32594
Number of successful extensions: 178
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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