Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00946
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.2  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 291 YCVYLILHSNQIIDSLFFYKKNSAVKLASKV 383
           YC  L++      + LF  K  +AVK+ SK+
Sbjct: 76  YCSVLLVFLTYFFNILFRKKLLNAVKILSKI 106


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 291 YCVYLILHSNQIIDSLFFYKKNSAVKLASKV 383
           YC  L++      + LF  K  +AVK+ SK+
Sbjct: 72  YCSVLLVFLTYFFNILFRKKLLNAVKILSKI 102


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 171 HRFRIYLKKKNIYIR 127
           H+FRIY++   I IR
Sbjct: 657 HKFRIYIQVTKIIIR 671


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 53  NILLRFIQQTFSCVYIFLTLYSVESL 130
           N +L     T+ C+Y ++ LY++  +
Sbjct: 151 NFMLHCNNTTWRCLYRWIVLYTLSKM 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,126
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)