Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00942
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 423 TIKNCNKPNKENVKNPLVRTN 485
           ++KNC   NKE    PL+ T+
Sbjct: 93  SVKNCKLKNKERKVKPLLITD 113


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 393 ENRNLWNKISTIKNCNKPNKENVKNPLVR 479
           EN+ L N+ S   + NK +K+N  +P +R
Sbjct: 99  ENKTLINETSLQLDENKLDKKNDDSPALR 127


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 393 ENRNLWNKISTIKNCNKPNKENVKNPLVR 479
           EN+ L N+ S   + NK +K+N  +P +R
Sbjct: 99  ENKTLINETSLQLDENKLDKKNDDSPALR 127


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 375 VFMVSCENRNLWNKISTIKNCNKPNKENVKN 467
           V MVSC++  L   +   K CN    E++ N
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGN 166


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 487 PTSKAHLNKCKLSRKV 534
           PT K HL    +S+KV
Sbjct: 504 PTKKLHLKNSPISKKV 519


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 34  EIMYFYKIMLL*MKLF*EIMDTSSIVSFNN 123
           +I Y ++ +   +KLF E+   S +V F N
Sbjct: 225 KICYLHQHLSKSVKLFNEVFGVSLLVLFGN 254


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 34  EIMYFYKIMLL*MKLF*EIMDTSSIVSFNN 123
           +I Y ++ +   +KLF E+   S +V F N
Sbjct: 243 KICYLHQHLSKSVKLFNEVFGVSLLVLFGN 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,621
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)