Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00942
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061046-1|AAL28594.1| 364|Drosophila melanogaster LD01470p pro... 48 1e-05
AE014297-4731|AAF57139.1| 364|Drosophila melanogaster CG12114-P... 48 1e-05
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 33 0.37
AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 33 0.37
AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 33 0.37
AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF... 33 0.37
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 33 0.37
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 33 0.37
AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 33 0.37
AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 33 0.37
BT001646-1|AAN71401.1| 641|Drosophila melanogaster RE41788p pro... 29 8.0
AY142214-1|AAN52142.1| 556|Drosophila melanogaster transcriptio... 29 8.0
AJ276130-1|CAB89084.1| 556|Drosophila melanogaster Diskette pro... 29 8.0
AE014298-2658|AAF48794.1| 556|Drosophila melanogaster CG7098-PA... 29 8.0
AE014134-1326|AAN10642.1| 561|Drosophila melanogaster CG13796-P... 29 8.0
AE014134-1325|AAG22421.2| 561|Drosophila melanogaster CG13796-P... 29 8.0
AE014134-1324|AAG22420.2| 561|Drosophila melanogaster CG13796-P... 29 8.0
>AY061046-1|AAL28594.1| 364|Drosophila melanogaster LD01470p
protein.
Length = 364
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +3
Query: 309 DQLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWNKISTIKNCNKPN--------KENVK 464
D L L +++EL +QK QL H+ MVS ENR LW+++S I + N +
Sbjct: 82 DVLSLKAQVSELQRQKEQLEEHIGMVSNENRRLWSRLSQISKDQQLNALPSSTDSRAQQN 141
Query: 465 NPLVRTNTYIQSTP 506
LVR+ T+ Q +P
Sbjct: 142 QNLVRSKTFTQHSP 155
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 178 ELALHAMRDRCLLLQRRINVLENDN 252
++AL +++RC+ LQRR+ +E +N
Sbjct: 34 QVALQTIKERCIQLQRRVASMEEEN 58
>AE014297-4731|AAF57139.1| 364|Drosophila melanogaster CG12114-PA
protein.
Length = 364
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +3
Query: 309 DQLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWNKISTIKNCNKPN--------KENVK 464
D L L +++EL +QK QL H+ MVS ENR LW+++S I + N +
Sbjct: 82 DVLSLKAQVSELQRQKEQLEEHIGMVSNENRRLWSRLSQISKDQQLNALPSSTDSRAQQN 141
Query: 465 NPLVRTNTYIQSTP 506
LVR+ T+ Q +P
Sbjct: 142 QNLVRSKTFTQHSP 155
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 178 ELALHAMRDRCLLLQRRINVLENDN 252
++AL +++RC+ LQRR+ +E +N
Sbjct: 34 QVALQTIKERCIQLQRRVASMEEEN 58
>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.
Length = 1027
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 830 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 889
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 890 LNNGNQNNNNRSSNPPQNNN 909
>AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein.
Length = 1023
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 826 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 885
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 886 LNNGNQNNNNRSSNPPQNNN 905
>AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein.
Length = 1015
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 818 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 877
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 878 LNNGNQNNNNRSSNPPQNNN 897
>AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF,
isoform F protein.
Length = 961
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 764 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 823
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 824 LNNGNQNNNNRSSNPPQNNN 843
>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
isoform D protein.
Length = 1027
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 830 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 889
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 890 LNNGNQNNNNRSSNPPQNNN 909
>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
isoform C protein.
Length = 1027
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 830 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 889
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 890 LNNGNQNNNNRSSNPPQNNN 909
>AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB,
isoform B protein.
Length = 1023
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 826 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 885
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 886 LNNGNQNNNNRSSNPPQNNN 905
>AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA,
isoform A protein.
Length = 1023
Score = 33.1 bits (72), Expect = 0.37
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHHVFMVSCENRN-LWNKIST 425
Q + +L + ND + D D +D ++ L+ SQ + F S N N +N S
Sbjct: 826 QQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSN 885
Query: 426 IKNCNKPNKENVKNPLVRTN 485
+ N N+ N NP N
Sbjct: 886 LNNGNQNNNNRSSNPPQNNN 905
>BT001646-1|AAN71401.1| 641|Drosophila melanogaster RE41788p
protein.
Length = 641
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 584 YSYLLISEIFLPSLIQNTFLDNLHLFRCALDVGIGTN*WVFHIFFIRFIT 435
+++LLIS I + + T++ F+C L +G F IFFIRF T
Sbjct: 501 FTHLLISGILV---LMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFAT 547
>AY142214-1|AAN52142.1| 556|Drosophila melanogaster transcriptional
adapter 3 protein.
Length = 556
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 204 SLSITTTQNKCFGE*QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHH 374
S++I Q G +H+ K N + H DD +D L +A N S L HH
Sbjct: 195 SMTILKQQGVSGGTSKHQAK------NSPLVVHTDDSMDYLPTLAAANASGSVLPHH 245
>AJ276130-1|CAB89084.1| 556|Drosophila melanogaster Diskette
protein.
Length = 556
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 204 SLSITTTQNKCFGE*QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHH 374
S++I Q G +H+ K N + H DD +D L +A N S L HH
Sbjct: 195 SMTILKQQGVSGGTSKHQAK------NSPLVVHTDDSMDYLPTLAAANASGSVLPHH 245
>AE014298-2658|AAF48794.1| 556|Drosophila melanogaster CG7098-PA
protein.
Length = 556
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 204 SLSITTTQNKCFGE*QHRLKLDATRNNDNIAFHDDDQLDLLQKIAELNKQKSQLMHH 374
S++I Q G +H+ K N + H DD +D L +A N S L HH
Sbjct: 195 SMTILKQQGVSGGTSKHQAK------NSPLVVHTDDSMDYLPTLAAANASGSVLPHH 245
>AE014134-1326|AAN10642.1| 561|Drosophila melanogaster CG13796-PC,
isoform C protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 584 YSYLLISEIFLPSLIQNTFLDNLHLFRCALDVGIGTN*WVFHIFFIRFIT 435
+++LLIS I + + T++ F+C L +G F IFFIRF T
Sbjct: 421 FTHLLISGILV---LMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFAT 467
>AE014134-1325|AAG22421.2| 561|Drosophila melanogaster CG13796-PB,
isoform B protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 584 YSYLLISEIFLPSLIQNTFLDNLHLFRCALDVGIGTN*WVFHIFFIRFIT 435
+++LLIS I + + T++ F+C L +G F IFFIRF T
Sbjct: 421 FTHLLISGILV---LMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFAT 467
>AE014134-1324|AAG22420.2| 561|Drosophila melanogaster CG13796-PA,
isoform A protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 584 YSYLLISEIFLPSLIQNTFLDNLHLFRCALDVGIGTN*WVFHIFFIRFIT 435
+++LLIS I + + T++ F+C L +G F IFFIRF T
Sbjct: 421 FTHLLISGILV---LMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFAT 467
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,986,265
Number of Sequences: 53049
Number of extensions: 496019
Number of successful extensions: 1615
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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