Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00936
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 165 LNTRWAVSSSTHLSNKKKIYYSFFI 239
           LN    V++     +KK +YYSF+I
Sbjct: 161 LNKNNVVATGRFTFHKKNLYYSFYI 185


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 656 NRINTLFMHEVEIQNTITITHLPEEI 579
           +RINT+ MH       +T   +P EI
Sbjct: 86  SRINTMLMHLAIADLLVTFLMMPLEI 111


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 656 NRINTLFMHEVEIQNTITITHLPEEI 579
           +RINT+ MH       +T   +P EI
Sbjct: 86  SRINTMLMHLAIADLLVTFLMMPLEI 111


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -3

Query: 373 LRLKSLYEVSVYL*IFFIN*TLSVIRRH 290
           L +++L ++S+YL  + +  T+  ++RH
Sbjct: 66  LVVRNLLDISLYLNAYHVFVTMMTLKRH 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,805
Number of Sequences: 336
Number of extensions: 4196
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)