Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00931
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 89 3e-18
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 89 3e-18
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 83 2e-16
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 75 5e-14
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 75 5e-14
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 74 1e-13
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 73 2e-13
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 68 8e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 66 2e-11
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 66 2e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 61 7e-10
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 59 3e-09
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 58 8e-09
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 56 2e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 50 2e-06
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 4e-06
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 39 0.003
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 38 0.009
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 33 0.26
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 28 7.5
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 28 7.5
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 28 7.5
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 28 7.5
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 28 7.5
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 89.0 bits (211), Expect = 3e-18
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +2
Query: 254 VICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPV 433
++ P E Y+GG F + +YP +PPKV T +YHPNI+ G++CL+ILR W P
Sbjct: 37 IMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPA 96
Query: 434 LTVNSIVYGLQYLFLEPNPEDPL 502
LT++ ++ + L +PNP+DPL
Sbjct: 97 LTISKVLLSICSLLCDPNPDDPL 119
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 89.0 bits (211), Expect = 3e-18
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +2
Query: 254 VICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPV 433
++ P E Y+GG F + +YP +PPKV T +YHPNI+ G++CL+ILR W P
Sbjct: 37 IMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPA 96
Query: 434 LTVNSIVYGLQYLFLEPNPEDPL 502
LT++ ++ + L +PNP+DPL
Sbjct: 97 LTISKVLLSICSLLCDPNPDDPL 119
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +2
Query: 242 EF*IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED 421
E + + P EG YRGGKF F V P Y + PP VKC T V+HPNI+ +G++CL+ILR++
Sbjct: 60 ELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQN 119
Query: 422 ------WKPVLTVNSIVYGLQYLF 475
W+P + +V+GL LF
Sbjct: 120 SLDQYGWRPTRNLTDVVHGLVSLF 143
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 83.0 bits (196), Expect = 2e-16
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTV 442
PD+ + GG F + YP PKV+ T +YHPNID G +CL+IL++ W P L +
Sbjct: 43 PDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQI 102
Query: 443 NSIVYGLQYLFLEPNPEDPL 502
+++ +Q L PNPEDPL
Sbjct: 103 RTVLLSIQALLSAPNPEDPL 122
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 430
I+ P E + G F S + YP++PP VK + ++HPN+ +G++CL+IL+ W P
Sbjct: 39 IIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSP 98
Query: 431 VLTVNSIVYGLQYLFLEPNPEDPLN 505
V +I+ +Q L EPNP P N
Sbjct: 99 TYDVAAILTSIQSLLDEPNPNSPAN 123
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 430
I+ P E + G F S + YP++PP VK + ++HPN+ +G++CL+IL+ W P
Sbjct: 39 IIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSP 98
Query: 431 VLTVNSIVYGLQYLFLEPNPEDPLN 505
V +I+ +Q L EPNP P N
Sbjct: 99 TYDVAAILTSIQSLLDEPNPNSPAN 123
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWK 427
+++ PD+ Y G F +YP +PPKV ET +YHPN+D EG CL I+ E+WK
Sbjct: 37 VLLIPDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWK 96
Query: 428 PVLTVNSIVYGLQYLFLEPNPEDPL 502
P ++ L L EP P P+
Sbjct: 97 PATKTEQVMMALLSLINEPEPSHPI 121
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLT 439
P + Y GG F K+ YP PP VK T ++HPN+ + G +CL+IL++ W LT
Sbjct: 46 PPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLT 105
Query: 440 VNSIVYGLQYLFLEPNPEDP 499
+ +++ +Q L P P+DP
Sbjct: 106 LRTVLLSIQALMCTPEPKDP 125
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL------ 412
+VI P + Y GG F +YP +PPK+K + ++HPNID EGNVC++IL
Sbjct: 39 LVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDD 98
Query: 413 -------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 505
E W PV TV +I+ + + +PN E P N
Sbjct: 99 KWGYERPEERWLPVHTVETILLSVISMLTDPNFESPAN 136
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 278 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 451
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 452 VYGLQYLFLEPNPEDP 499
+ G+Q L PN EDP
Sbjct: 113 LIGIQDLLNHPNIEDP 128
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 278 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 451
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 452 VYGLQYLFLEPNPEDP 499
+ G+Q L PN EDP
Sbjct: 113 LIGIQDLLNHPNIEDP 128
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR--------- 415
P + Y+GG F S + NYP+ PP +K T V+HPN+ G++C++IL
Sbjct: 49 PPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSG 108
Query: 416 ----EDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 505
E W P +V +I+ + L EPN P N
Sbjct: 109 ELACERWNPTQSVRTILLSVISLLNEPNTSSPAN 142
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKV---------------KCETAVYHPNIDLE-GN 394
P+ Y GG F + +YP EPPKV K T ++HPNI + G
Sbjct: 60 PEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGT 119
Query: 395 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 499
+CL+IL++ W LT+ +++ LQ + P P DP
Sbjct: 120 ICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDP 154
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 VICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKC--ETAVYHPNIDLEGNVCLNILREDWK 427
V+ + Y G F+ F GP YP P+V ET HP+I G++CL+IL +DW
Sbjct: 42 VVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWT 101
Query: 428 PVLTVNSI 451
P L+V S+
Sbjct: 102 PALSVQSV 109
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL------ 412
++ P+E + G F +YP PPK++ ++HPNI +G VC++IL
Sbjct: 40 LITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDD 99
Query: 413 -------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 505
E W PV ++ I+ + + EPN E P N
Sbjct: 100 PTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPAN 137
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 ICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL-NILREDWKP 430
I D Y+ F + V YP +PP +K VYHPN+D + +C +L+E+WKP
Sbjct: 50 IIGDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKP 109
Query: 431 VLTVNSIVYGLQYLFLEPNPEDPLN 505
T+ ++ L L EP+ P+N
Sbjct: 110 ETTMEDVLLNLIVLLNEPDLSRPVN 134
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 266 DEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILRED-WKPVLT 439
+E Y GG F K+G +YP + P VK T ++HP++ +G +CL+ + W +T
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMT 448
Query: 440 VNSIVYGLQYLFLEPNPEDPLN 505
+ ++ +Q N ++P++
Sbjct: 449 IYKVLIVIQSWMSNFNEKEPID 470
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 439
P + Y G + + YP + P + ++HPNID G VCL+++ + W +
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYD 101
Query: 440 VNSIV-YGLQYLFLEPNPEDPLN 505
+ +I L L PN DPLN
Sbjct: 102 LTNIFDTFLPQLLTYPNAADPLN 124
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 278 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIV 454
+ GG++ S +P PP + +T ++HPN+DL G++ L +L +E W ++ ++
Sbjct: 83 WEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
Query: 455 YGLQYLFLEPN 487
+ L P+
Sbjct: 142 REISNLLATPD 152
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = +2
Query: 263 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET-----AVYHPNIDLEGNVCLNIL----- 412
PD+ Y G F F YP PPK T ++PN+ +G +CL+IL
Sbjct: 452 PDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEG 511
Query: 413 --REDWKPVLTVNSIVYGLQ 466
E W P ++ ++ +Q
Sbjct: 512 RPEEKWNPYCSLMQVLVSIQ 531
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 395 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP--LNKKQRTSSKATGDFSNNTFREL 568
VC + +DWKP TV ++ QY+ + N DP + S + G F +T
Sbjct: 856 VCRSFTLKDWKPGNTVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFKGHTAAVT 915
Query: 569 C 571
C
Sbjct: 916 C 916
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 251 IVICPDEGFYRGGKFVFSFKVGPNYPHEP-PKVKCETAVYHPNIDLEGNVCLNILREDWK 427
I+ P Y GG F + P H P+V T ++HPN+ GN + ++ + +
Sbjct: 67 IIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGNWDMRGIQWERR 126
Query: 428 PVLTV--NSIVYGLQ 466
L V N IV G++
Sbjct: 127 SNLEVLYNFIVEGMR 141
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 254 VICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 397
+I P Y + + G NYP EPP V+ T V+ ++ V
Sbjct: 45 IIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 555 VLFEKSPVALELVRCFLLRGSSGF-GSKNKYWRPYTMELTVRTGFQSSLS 409
+ F+ SP E+ F L +S F +NKYW+ + + GF SLS
Sbjct: 392 ISFQNSPP--EIDAAFQLNNTSSFLFHQNKYWKVSGDPMRIEKGFPRSLS 439
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 69 MIKLFSLKQQKKDEEGSTRGGG 134
M K KQQK+D+ G++ GGG
Sbjct: 151 MAKFEQFKQQKEDQNGNSGGGG 172
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 150 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 245
SA QLR + LN ++ K FP P DLL+
Sbjct: 258 SALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 289
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 150 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 245
SA QLR + LN ++ K FP P DLL+
Sbjct: 333 SALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 150 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 245
SA QLR + LN ++ K FP P DLL+
Sbjct: 333 SALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 150 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 245
SA QLR + LN ++ K FP P DLL+
Sbjct: 333 SALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 150 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLN 245
SA QLR + LN ++ K FP P DLL+
Sbjct: 333 SALQLRYLQTLNSISAEKNSTIIFPFPIDLLS 364
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 262 AYNNLKFNRSSGSGNSVLHVFGRFNSFKSFVIRNW 158
A+N+L N S+G GN + G NS F+ W
Sbjct: 990 AWNSLTSNNSTGGGNGT-WISGALNSTGRFLTNTW 1023
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,962,050
Number of Sequences: 27780
Number of extensions: 324223
Number of successful extensions: 1065
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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