Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00929X
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 33 0.14
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 33 0.14
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 33 0.14
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 33 0.14
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.19
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 33 0.19
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 33 0.19
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 1.7
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 1.7
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 28 4.0
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 4.0
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 4.0
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 4.0
AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine r... 28 4.0
U80836-9|AAB37895.1| 303|Caenorhabditis elegans Hypothetical pr... 28 5.3
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 5.3
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 5.3
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 5.3
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 5.3
Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical pr... 27 7.0
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 7.0
U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 27 9.3
U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC024863-2|AAP31420.1| 366|Caenorhabditis elegans Prion-like-(q... 27 9.3
AC024863-1|AAF60877.1| 481|Caenorhabditis elegans Prion-like-(q... 27 9.3
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 315 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 315 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 315 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 315 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 264 NSGSCVITESYVSIEK-SQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLV 440
NS +C + +S + S SC +G Y A C SGC T AP T P V
Sbjct: 491 NSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAPTV 550
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.19
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 177 WERSCHRGRTGHKATYSFGLQ*EKMSGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTD 356
WE S H R S G E S +G C V+ + SC G+ + +
Sbjct: 153 WECSTHGVRR-----CSAGWSGEDCSNPICAGGCSNRGRCVAPNQC-SCADGF-NGTRCE 205
Query: 357 SCVPKCTSGCVNGTC--EAPEVCTCPEPLV 440
C+P+ +GCVNG C E P C C + +
Sbjct: 206 QCLPR--AGCVNGDCVNETPNTCKCRDGFI 233
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.19
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 177 WERSCHRGRTGHKATYSFGLQ*EKMSGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTD 356
WE S H R S G E S +G C V+ + SC G+ + +
Sbjct: 153 WECSTHGVRR-----CSAGWSGEDCSNPICAGGCSNRGRCVAPNQC-SCADGF-NGTRCE 205
Query: 357 SCVPKCTSGCVNGTC--EAPEVCTCPEPLV 440
C+P+ +GCVNG C E P C C + +
Sbjct: 206 QCLPR--AGCVNGDCVNETPNTCKCRDGFI 233
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 312 SQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPE--PLVLRRGHCV 461
SQSC + + ++CVP C C + +A TC P + + +C+
Sbjct: 183 SQSCIQKYEITVEQETCVPACMPACSSACVQAVTCSTCTNNCPSICSQANCI 234
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +3
Query: 252 SGKTNSGSCVITESYVSI-EKSQSCKTGWIYEAKT----DSCVPKCTSGCVNGTCEAPEV 416
SG GSC +V+ ++ Q T AKT D C+PKC S C+N P
Sbjct: 51 SGNCGCGSC---SGFVTCPDRCQPMCTQACVMAKTSVCVDQCMPKCDSACINLVRSGPSC 107
Query: 417 CTCPEPLVL 443
PL L
Sbjct: 108 DQQCMPLCL 116
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 357 SCVPKCTSGCVNGTCEAPEVC 419
+C+P CTS CV C P+ C
Sbjct: 309 ACMPSCTSSCVQSMC--PQQC 327
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 321 CKTGWIYEAKTDSC-VPKCTSGCVNGTCEAPEVCTCPE 431
C+ GW + C +P C S +NG C P C+C E
Sbjct: 877 CEDGW----QGSRCQIPLCNSCSLNGICTRPGFCSCFE 910
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = +3
Query: 246 KMSGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCT--SGCVNGTCEAPEV- 416
K GKT +G CV+ C I A++D+C+P C+ + C +GTC +
Sbjct: 1723 KKKGKTRAG-CVVPNR---------CSVDSICPAESDTCLPVCSVANVCSSGTCVSSNTT 1772
Query: 417 ----CTCP 428
C CP
Sbjct: 1773 AGYECICP 1780
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = +3
Query: 246 KMSGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCT--SGCVNGTCEAPEV- 416
K GKT +G CV+ C I A++D+C+P C+ + C +GTC +
Sbjct: 1723 KKKGKTRAG-CVVPNR---------CSVDSICPAESDTCLPVCSVANVCSSGTCVSSNTT 1772
Query: 417 ----CTCP 428
C CP
Sbjct: 1773 AGYECICP 1780
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 303 IEKSQSCKTG---WIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
++KS SC Y+ + C P C C N AP V C
Sbjct: 62 VQKSCSCAQPVQQQTYQIQASQCAPACQQSCQNQCQSAPSVSQC 105
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 303 IEKSQSCKTG---WIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
++KS SC Y+ + C P C C N AP V C
Sbjct: 62 VQKSCSCAQPVQQQTYQIQASQCAPACQQSCQNQCQSAPSVSQC 105
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 270 GSCVITESYVSIEKSQSCKTGWIY-EAKTDS-CVPKCTSGCVNGTCEAPEVCTCP 428
GSC I ES+ K +C G Y EA+ S C C N C TCP
Sbjct: 329 GSCTI-ESFSPKLKMVTCSDGKQYTEAEACSGSFESCDHDCPNSKCHPKLAFTCP 382
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 414 VCTCPEPLVLRRGHCV 461
+CTC EPLVL+ CV
Sbjct: 1221 LCTCNEPLVLKENKCV 1236
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 414 VCTCPEPLVLRRGHCV 461
+CTC EPLVL+ CV
Sbjct: 932 LCTCNEPLVLKENKCV 947
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 360 CVPKCTSGCVNGTCEAP-EVCTCPEPL 437
C KC C NG C+ CTCP+ L
Sbjct: 673 CNLKCRMDCPNGRCDPVFGYCTCPDGL 699
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 252 SGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCE 404
SG CV + SC+ G + ++ T SCV C G + CE
Sbjct: 1322 SGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCV--CPPGYIGTKCE 1370
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 360 CVPKCTSGCVNGTCEAP-EVCTCPEPL 437
C KC C NG C+ CTCP+ L
Sbjct: 673 CNLKCRMDCPNGRCDPVFGYCTCPDGL 699
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 252 SGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCE 404
SG CV + SC+ G + ++ T SCV C G + CE
Sbjct: 1322 SGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCV--CPPGYIGTKCE 1370
>AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein18 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 419 ADLWRLASSVHAPARAFRYTAVGLRLVYPAGLA*LTLLNAHV*FGYNARAAVSLARHLFL 240
A ++ + SV + F T + LR + AG +LN H F YN S H F+
Sbjct: 71 AAVFFIVDSVFSERSNFAPTLISLRCAFIAGT--YGILNIHFIFRYNVLKNTSFVSHYFM 128
>U80836-9|AAB37895.1| 303|Caenorhabditis elegans Hypothetical
protein B0432.10 protein.
Length = 303
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 270 GSCVITESYVSIEKSQSCKTGWI 338
G CV+ + Y+ EKSQS +GW+
Sbjct: 26 GKCVVQKDYLEDEKSQS-SSGWL 47
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 318 SCKTGWIYEAKTDSCVPKCTSGCV 389
+C++ + +A +C PKC+S CV
Sbjct: 275 ACQSSCVQQACAPACQPKCSSQCV 298
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 351 TDSCVPKCTSGCVNGTC 401
T SC+P C S CV C
Sbjct: 269 TSSCMPACQSSCVQQAC 285
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 384 CVNGT-CEAP-EVCTCPEPLVLRRGHCV 461
CV G+ C P +C CP L R G CV
Sbjct: 307 CVGGSICTLPIGICLCPGDLEAREGECV 334
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 339 YEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
Y+ +T C P C C N AP + C
Sbjct: 75 YQVQTSQCAPACQQSCQNQCQFAPSMNEC 103
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 339 YEAKTDSCVPKCTSGCVNGTCEAPEVCTC 425
Y+ +T C P C C N AP + C
Sbjct: 76 YQVQTSQCAPACQQSCQNQCQFAPSMNEC 104
>Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical
protein F23D12.10 protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 242 LL*TKRVRCLMTGTSTVATPFPSFMASQNNDRS-PMTNNRTDKTFPHSIALCSRSDAIVY 66
L+ T + T +AT M ++D PM N K + +CS D +VY
Sbjct: 235 LMRTNNTESNLKNTEKIATSINEMMDMISDDNYIPMLQNNVAKHQKRKVEICSLDDNVVY 294
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 345 AKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVE 464
++T C +C SG + C+ + C L GHCV+
Sbjct: 262 SRTTQC--ECPSGFMGADCKELQARPCDREPCLNGGHCVD 299
>U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical
protein F59A6.10 protein.
Length = 155
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 357 SCVPKCTSGCVNGTCEAPEVC 419
+C+P +GC C AP+VC
Sbjct: 51 ACLPVEANGCARMECSAPKVC 71
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = +3
Query: 264 NSGSCVITESYVSIEKSQSCKTGWI---YEAKTDSCVPKCTSGCVNGTCEAPEV----CT 422
N+G C T ++ + +C GW + D C+P S N TC+ P+ CT
Sbjct: 384 NNGKCASTIDGITTNYTCTCDDGWTGTNCDTMIDFCIPNPCS--YNSTCK-PKFKGYDCT 440
Query: 423 C 425
C
Sbjct: 441 C 441
>U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical
protein F58F9.11 protein.
Length = 183
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 267 SGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEV 416
+G C S SI + +C TG ++ D+ +C++ C TC P V
Sbjct: 12 AGICRADRSTCSI--NVTCPTGGLWSEWADAEGVECSASCAQRTCCIPYV 59
>AC024863-2|AAP31420.1| 366|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform b protein.
Length = 366
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +2
Query: 44 GFNCDKLCKRSRRNANIELCCVEM--FYQFC-YSSSAN-DHC 157
G +CD CK S NAN+ C F+ C Y ++ D+C
Sbjct: 290 GPSCDLTCKASHVNANVAACVSNSTGFFSICNYITNGQVDNC 331
>AC024863-1|AAF60877.1| 481|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform a protein.
Length = 481
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +2
Query: 44 GFNCDKLCKRSRRNANIELCCVEM--FYQFC-YSSSAN-DHC 157
G +CD CK S NAN+ C F+ C Y ++ D+C
Sbjct: 290 GPSCDLTCKASHVNANVAACVSNSTGFFSICNYITNGQVDNC 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,049,425
Number of Sequences: 27780
Number of extensions: 280843
Number of successful extensions: 1084
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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