Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00926X
         (590 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028     31   0.52 
09_04_0463 - 17803120-17803233,17803647-17803758,17803866-178039...    28   4.8  
07_03_1660 + 28435230-28435331,28435518-28435748                       28   4.8  
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504...    27   8.5  
04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061     27   8.5  

>01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028
          Length = 444

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 509 RQFLEAGTGLACMLLDVVVFKVLASQ 432
           R FL+AGTGL C+ L  +  K+L+S+
Sbjct: 264 RPFLDAGTGLTCLTLRGMAIKLLSSE 289


>09_04_0463 -
           17803120-17803233,17803647-17803758,17803866-17803927,
           17804171-17804269,17804370-17804474,17804560-17804639,
           17806445-17806517,17806611-17806700,17807215-17807277,
           17808104-17808155,17808504-17808604,17809139-17809238,
           17809683-17809746,17810127-17810184,17810549-17810635,
           17810736-17810870,17810950-17811054,17811247-17811351,
           17811427-17811663,17812287-17812380,17812863-17813020,
           17813289-17813363,17813448-17813512,17814206-17814260
          Length = 762

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 70  AQYNGKCPEQAKSFLRNSYGVKG-FKNKNKGHADIH 174
           A++NGK  +  + F++   G+KG F  +  G AD++
Sbjct: 482 AEWNGKYRDDLRRFIKGDPGMKGVFATRVSGSADLY 517


>07_03_1660 + 28435230-28435331,28435518-28435748
          Length = 110

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = -3

Query: 432 AGVVANSIIKSHVIKIMQII-----LDGAA*RKEATSNFACMLIVLHFNW 298
           A ++ N II S ++ +M +I     L+ A  +KE  + F  ML++   NW
Sbjct: 16  AQLLVNGIIYSSLVDLMALIPGFMDLEYATRKKEMANKFRVMLLIKCLNW 65


>06_03_0921 + 25949453-25949986,25950150-25950188,25950380-25950445,
            25950526-25950669,25951416-25951612,25952281-25952443,
            25952760-25952873,25953304-25953401,25953964-25954042,
            25954356-25954514,25954690-25954779,25955790-25955923,
            25956513-25956672,25956826-25956909,25957000-25957167,
            25957321-25957446,25958088-25958225,25958311-25958414,
            25958832-25958895,25959229-25959317,25959393-25959534,
            25959937-25960000,25960085-25960152,25960399-25960521,
            25960604-25960669,25960857-25960962,25961076-25961167,
            25961243-25961344
          Length = 1170

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 253  NGKLSYLVGETNGKPPIKMQYNKHTSKITGGFF 351
            NGK++  V    G PPI +Q  KH    TG F+
Sbjct: 1135 NGKIT--VDFIEGFPPIDLQLGKHVFLSTGDFY 1165


>04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061
          Length = 346

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 339 SNFACMLIVLHFNWRFTVRFSDKV 268
           S   C  + LHF+WR T  F D V
Sbjct: 44  SKLICRAMALHFSWRSTSPFLDTV 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,965,972
Number of Sequences: 37544
Number of extensions: 279939
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)