Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00924
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot...    29   5.3  
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro...    29   5.3  
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ...    29   5.3  
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P...    29   5.3  

>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156
           protein.
          Length = 1412

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 207 PQWIEEICPNGYQMDVLEYAVRCGTT 284
           P+WI + C  GY +   +Y VR G T
Sbjct: 277 PEWIFDSCNRGYALPTKDYEVRPGKT 302


>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p
           protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 207 PQWIEEICPNGYQMDVLEYAVRCGTT 284
           P+WI + C  GY +   +Y VR G T
Sbjct: 284 PEWIFDSCNRGYALPTKDYEVRPGKT 309


>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
           protein MUS101 protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 207 PQWIEEICPNGYQMDVLEYAVRCGTT 284
           P+WI + C  GY +   +Y VR G T
Sbjct: 284 PEWIFDSCNRGYALPTKDYEVRPGKT 309


>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
           protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 207 PQWIEEICPNGYQMDVLEYAVRCGTT 284
           P+WI + C  GY +   +Y VR G T
Sbjct: 284 PEWIFDSCNRGYALPTKDYEVRPGKT 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,644,670
Number of Sequences: 53049
Number of extensions: 608354
Number of successful extensions: 1107
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)