Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00924
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   7.2  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.5  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 578 FSMAFWRLRC 607
           F +AFWRL C
Sbjct: 366 FRLAFWRLTC 375


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 268 TAYSSTSIWYPLGQISSIHCGESSAKALFMTTAT 167
           T Y   S+WY + + S+    +   K LF+   T
Sbjct: 274 TPYYVMSLWYWIDRNSAYKIDQRIQKGLFLFACT 307


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 287 YQYNNGY*VENNTRRKR 337
           Y YNN Y   NN   K+
Sbjct: 98  YNYNNKYNYNNNNYNKK 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,443
Number of Sequences: 438
Number of extensions: 4285
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)