Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00923
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 134 1e-32
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 134 1e-32
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 70 3e-13
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 70 3e-13
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 39 8e-04
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.28
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 30 0.28
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.64
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.64
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.5
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.4
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 3.4
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 3.4
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 5.9
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 7.9
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 134 bits (324), Expect = 1e-32
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = +1
Query: 4 KTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPV 183
K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPV
Sbjct: 429 KAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPV 488
Query: 184 VRVAVEPKNPADLPKLVEGLKRLANLTP 267
V+VAVE KN DLPKLVEGLKRL+ P
Sbjct: 489 VQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
Score = 133 bits (321), Expect = 3e-32
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = +3
Query: 255 KSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 434
KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S
Sbjct: 513 KSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSS 572
Query: 435 QLCLSKSPNKHNRLFMKAQPMPDGL 509
LSKSPNKHNR+FM A+PM + L
Sbjct: 573 MTALSKSPNKHNRIFMTAEPMSEEL 597
Score = 91.9 bits (218), Expect = 8e-20
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +2
Query: 518 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGANILVDCSKGVQYLNEI 694
I+ G VNPRDDFK RAR + +++ +DVT+ARKIWCFGP+ TGAN++VD +K V YLNEI
Sbjct: 601 IETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEI 659
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 134 bits (324), Expect = 1e-32
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = +1
Query: 4 KTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPV 183
K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPV
Sbjct: 429 KAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPV 488
Query: 184 VRVAVEPKNPADLPKLVEGLKRLANLTP 267
V+VAVE KN DLPKLVEGLKRL+ P
Sbjct: 489 VQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
Score = 133 bits (321), Expect = 3e-32
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = +3
Query: 255 KSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 434
KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S
Sbjct: 513 KSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSS 572
Query: 435 QLCLSKSPNKHNRLFMKAQPMPDGL 509
LSKSPNKHNR+FM A+PM + L
Sbjct: 573 MTALSKSPNKHNRIFMTAEPMSEEL 597
Score = 91.9 bits (218), Expect = 8e-20
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +2
Query: 518 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGANILVDCSKGVQYLNEI 694
I+ G VNPRDDFK RAR + +++ +DVT+ARKIWCFGP+ TGAN++VD +K V YLNEI
Sbjct: 601 IETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEI 659
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 70.1 bits (164), Expect = 3e-13
Identities = 34/89 (38%), Positives = 51/89 (57%)
Frame = +3
Query: 255 KSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 434
KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV + ET + S
Sbjct: 625 KSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSS 684
Query: 435 QLCLSKSPNKHNRLFMKAQPMPDGLQRTL 521
C S +PNK NR+ M +P+ G+ +
Sbjct: 685 IKCFSDTPNKKNRITMVVEPLEKGISNDI 713
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 515 DIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGANILVD 661
DI+ G+VN K + + + Y++D+ +R IW FGP+ G NIL D
Sbjct: 712 DIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRD 760
Score = 44.4 bits (100), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 37 RYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPK 207
RY ++ +G + L GVD + KT TI + + + + + V +VAVEP
Sbjct: 549 RYRLHVDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPH 608
Query: 208 NPADLPKLVEGLKR 249
NP++LPKL++GL++
Sbjct: 609 NPSELPKLLDGLRK 622
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 70.1 bits (164), Expect = 3e-13
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +3
Query: 255 KSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 434
++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YRET D
Sbjct: 588 QADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPD 647
Query: 435 QLCLSK 452
L +K
Sbjct: 648 LLAKNK 653
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 7 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVV 186
T++ LMMG+ + +E VP+GN+ + G+ +++T T+ + N N+ + + P+V
Sbjct: 505 TVESLYLMMGQELVYLETVPAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIV 564
Query: 187 RVAVEPKNPADLPKLVEGLKRLANLTPWCSVLM-KNQENTL 306
RVA+EP P ++ KLV GL L P + + +N E+ +
Sbjct: 565 RVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVI 605
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 38.7 bits (86), Expect = 8e-04
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 KSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 428
+ DP + ++ ES E I++G GELHLE+ ++ + ++ + + P V++RET++++
Sbjct: 499 REDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFRETLSKK 556
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.28
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 342 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 500
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 30.3 bits (65), Expect = 0.28
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 282 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 461
+EE+ + A E C++DL++ + K+SD Y T+ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 462 KHNRLFMKAQPMPDGLQRT 518
KHN+L K +P+P L T
Sbjct: 249 KHNKLVKKHKPLPSTLDYT 267
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.64
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 427 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 260
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.1 bits (62), Expect = 0.64
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 KSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 431
+ DP + + E+G+ ++ G G +HL++ + L + V YRET+ + S
Sbjct: 469 REDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVGYRETLIDVS 527
Query: 432 DQLCLSKSPNKHNRLF-MKAQPMPDGLQRTLMR 527
+ NK N + + P+ D TL +
Sbjct: 528 FNSVTLSTENKENLIINVYLIPISDEGDETLKK 560
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 88 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 180
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 333 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 464
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +3
Query: 447 SKSPNKHNRLFMKAQPMPDGLQRTLMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGAL 626
S+ P H ++P+ L RV +P ++S+ L + +P P +
Sbjct: 984 SEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVP----ST 1039
Query: 627 APRVPAPTSWWIAPKEFS 680
AP VP PTS PK S
Sbjct: 1040 APPVPIPTSTPPVPKSSS 1057
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 97 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 186
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 518 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGANIL 655
++E + R+ + Y + + VT ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 634 LGAKAPNLTGFGNIVFVLFCKIPSAS 557
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 602 EARKIWCFGPEGTGANILVD--CSKGVQYLNE 691
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 527 PHQCPLETIRHGLSLHE*TVVLVGRL*E 444
P P E++RH +SL+E T + +GRL E
Sbjct: 319 PPNAP-ESVRHLISLNEETWIQIGRLAE 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,040,476
Number of Sequences: 5004
Number of extensions: 65094
Number of successful extensions: 220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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