Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00920X
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 79 2e-15
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 71 4e-13
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 41 7e-04
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 40 0.002
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 39 0.003
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.007
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 36 0.015
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 36 0.015
02_05_1202 + 34932291-34933027,34933297-34933774 35 0.035
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.081
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.25
11_06_0584 - 25220371-25222917 31 0.76
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 30 1.3
01_01_0735 + 5730783-5733320 29 2.3
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 3.1
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 3.1
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 29 3.1
05_07_0064 + 27440520-27440942,27442387-27442998,27443109-274431... 28 5.3
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 5.3
07_03_1544 - 27585581-27585757,27585986-27586091,27586246-275863... 27 7.1
02_05_0565 + 30010395-30010485,30011604-30011678,30011913-300121... 27 7.1
10_08_0494 - 18308105-18309490 27 9.3
01_05_0029 + 17345520-17345765,17345883-17346638 27 9.3
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 8 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 187
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 188 VLLTESNAIAYYVANES 238
V ESNAIA YV + S
Sbjct: 625 VF--ESNAIARYVLSSS 639
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 8 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 187
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 188 VLLTESNAIAYYV 226
V ESNAIA YV
Sbjct: 64 VF--ESNAIARYV 74
Score = 50.4 bits (115), Expect = 9e-07
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +1
Query: 265 ARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 444
A + QW +S +E+ + W+FP LG + + E A + L +L L+ HL + T+L
Sbjct: 662 AHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 721
Query: 445 VTERITLADVIVFSTLLHAF 504
V +TLAD+++ L F
Sbjct: 722 VGHSVTLADIVMTCNLYMGF 741
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +1
Query: 265 ARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 444
A + QW +S +E+ W++P LGI + + E A + L +L L+ HL + T+L
Sbjct: 101 AHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 160
Query: 445 VTERITLADVIVFSTLLHAF 504
V +TLAD+++ L F
Sbjct: 161 VGHSVTLADIVMTCNLYMGF 180
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +2
Query: 8 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 187
VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P E+ +G
Sbjct: 28 VLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGA 87
Query: 188 VLLTESNAIAYYVA 229
V ESNAIA YVA
Sbjct: 88 VF--ESNAIARYVA 99
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 265 ARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 444
+ + QW +S +E+ W++P LG + E A + L +L L+ HL + T+L
Sbjct: 116 SHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYL 175
Query: 445 VTERITLADVIVFSTLLHAF 504
V +TLAD+++ L + F
Sbjct: 176 VGHSVTLADIVMTCNLYYGF 195
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 50 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 226
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 220
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 221 YV 226
Y+
Sbjct: 74 YI 75
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +1
Query: 385 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 492
S+ AA LDG+L +RTFLV+ +++AD++V+S L
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNL 128
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 220
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 221 YV 226
Y+
Sbjct: 74 YI 75
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 385 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 492
S+ A +DG+L++RTFLV +T+AD+ V+S L
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVWSNL 126
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +2
Query: 44 KALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYY 223
+ L+ + G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y
Sbjct: 17 RILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKY 74
Query: 224 VANESLRGGDRL 259
+ + G D L
Sbjct: 75 ILRK--HGSDLL 84
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 358 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 495
+++ + A +L AAL L+ HL +L + +TLADV +F+TL+
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLFTTLV 297
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.081
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 116 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDR 256
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G++
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNK 86
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.25
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 11 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 187
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 188 VLLTESNAIAYYVANE 235
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 455 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 291
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 373 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV--FSTLLHAFQ 507
E AK++LL L+ L+G L R+F + D+++ FS++ H ++
Sbjct: 110 EMAKAELLDQLRRLEGVLGDRSFFSGDEFGFLDIVLIPFSSMFHGYK 156
>01_01_0735 + 5730783-5733320
Length = 845
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 91 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 192
T F +W D + + +E SC+K C+ C K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 428 SHAPSLLPRESHLPMSLSS 484
+H PSL+P ESHL S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 131 FLKKFPAGKVPAFESADGK 187
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 491 SVLKTMTSASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEA 312
S + M +A V + +K RVR PSST ++A+RS C + + + A+
Sbjct: 410 SAVDRMVNA-VKVEPKKKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVT 468
Query: 311 GSSSLS 294
SS LS
Sbjct: 469 ESSKLS 474
>05_07_0064 +
27440520-27440942,27442387-27442998,27443109-27443175,
27443271-27443362,27443493-27443708,27443869-27444006,
27444325-27444474
Length = 565
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +1
Query: 253 SATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLT 432
++ + V +W + +LP A L ++ K+ V+R KS L A G+L+
Sbjct: 405 NSNKNNVARWGNLIGYIVLPFRIAMFHDPLEYIRQGKRTVDRKKSSLEAIFTYWSGNLIV 464
Query: 433 RTFLVTERITLADVIVFSTLL 495
+ F + L ++ +T L
Sbjct: 465 KLFGIKTAAALCHGMLANTTL 485
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 377 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 258
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>07_03_1544 -
27585581-27585757,27585986-27586091,27586246-27586338,
27587840-27587958,27588486-27588746,27589226-27589515,
27589624-27590152
Length = 524
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 521 RV*HGWKACSSVLKT-MTSASVILSVTRKV 435
R+ H W ACS VL+ + SAS +L + +++
Sbjct: 391 RLDHPWSACSGVLRRWVDSASTVLPIIKEL 420
>02_05_0565 +
30010395-30010485,30011604-30011678,30011913-30012138,
30014432-30014649,30015170-30015303,30015424-30015675,
30016009-30016416
Length = 467
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 467 ASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNC 351
ASV+L + +R S T + ASR+ A +TF L C
Sbjct: 241 ASVLLEIEDTLRSPPPESETMRTASRASIAVTTFFYLCC 279
>10_08_0494 - 18308105-18309490
Length = 461
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 376 RAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQPC 513
R D+L L + +LT ++ E +T D+IV++ L+H F C
Sbjct: 406 RTVIDVLCKLGRVYDAVLTLKQMINEGLT-PDIIVYTPLIHGFCTC 450
>01_05_0029 + 17345520-17345765,17345883-17346638
Length = 333
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 161 PAFESADGKVLLTESNAIAYYVANESLRGGDRLP 262
P S+DG + E + I Y L GG+R+P
Sbjct: 178 PLEVSSDGTIKFEEKDGIDYAAVTVQLPGGERVP 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,932,492
Number of Sequences: 37544
Number of extensions: 361714
Number of successful extensions: 996
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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