Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00916
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1747 + 29188568-29188715,29188793-29189541                       31   1.1  
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980...    28   6.1  
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882...    28   8.1  
05_02_0124 + 6849034-6851502                                           28   8.1  
01_06_1147 + 34892415-34893702,34894051-34894676                       28   8.1  

>07_03_1747 + 29188568-29188715,29188793-29189541
          Length = 298

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +1

Query: 52  PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 204
           PPP TT++  V L TA +   S   +  QF+C+     TTC  + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260


>10_06_0028 -
           9802362-9802475,9802919-9803090,9803167-9803208,
           9803344-9804011,9804098-9804418,9804495-9804833,
           9804856-9805109,9805300-9805510
          Length = 706

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 362 SGKTSGTLPRELPPRHGPGSAPHWTEPSHPTLLTRTT 252
           S  TS   P E P   GP +  H TEP+  TL+ R T
Sbjct: 353 SSCTSTEAPAEQP--EGPAAVDHITEPTSCTLVIRVT 387


>07_03_1400 +
           26287124-26287298,26287925-26288007,26288141-26288270,
           26288369-26288442,26288797-26288883,26288976-26289100,
           26289232-26289292,26289606-26289683,26289785-26289890,
           26289978-26290123,26290264-26290380
          Length = 393

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +3

Query: 138 ISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 227
           ++++   W ND+++C F+  SR  +S+ M+
Sbjct: 83  VNLEGGGWCNDVKSCVFRKSSRRGSSNHME 112


>05_02_0124 + 6849034-6851502
          Length = 822

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 347 GTLPRELPPRHGPGSAPHWTEPSHPTLL 264
           G LPR+ PP   P S P+ T P +P  L
Sbjct: 10  GKLPRQPPPPPPPPSPPNSTFPRYPKSL 37


>01_06_1147 + 34892415-34893702,34894051-34894676
          Length = 637

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 1   PRNACGGLTWYC*TRLQPPPGTTLSAPVYLITAPSPG 111
           P N+  G  + C   LQP PGT  S P    T+PSPG
Sbjct: 210 PANSFLGNAFLCGFPLQPCPGTAPS-PSPSPTSPSPG 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,843,991
Number of Sequences: 37544
Number of extensions: 323447
Number of successful extensions: 1116
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)