Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00916
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 6e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 45 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 4e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 8e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 8e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 31 0.008
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.008
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 31 0.008
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 30 0.024
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.097
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.68
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.4 bits (115), Expect = 2e-08
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +3
Query: 6 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 173
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 174 QTCTFKFGSRMHNSDEMDFVI 236
QTC KFGS N D++ +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.6 bits (108), Expect = 1e-07
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 SERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 179
S+ +WRPD+VL N A A +A + + G V W + + ++ +P D QT
Sbjct: 107 SDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQT 166
Query: 180 CTFKFGSRMHNSDEMD 227
C KFGS ++ ++D
Sbjct: 167 CVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 1e-07
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 SERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 179
S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D QT
Sbjct: 103 SDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQT 162
Query: 180 CTFKFGSRMHNSDEMD 227
C KFGS ++ ++D
Sbjct: 163 CVMKFGSWTYDGFQVD 178
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.8 bits (106), Expect = 2e-07
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 173
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 174 QTCTFKFGSRMHNSDEMDFVIDKR 245
C FGS +H+ +E++ +DK+
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKK 204
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPND 170
SE +W PD+VL N A G+Y + +A + G VSW + + ++ +P D
Sbjct: 112 SENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFD 168
Query: 171 MQTCTFKFGSRMHNSDEMD 227
Q+C KFGS +N ++D
Sbjct: 169 EQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 5e-07
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 195 MKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 5e-07
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 195 MKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 6e-07
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 6e-07
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPND 170
S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P D
Sbjct: 107 SDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYD 163
Query: 171 MQTCTFKFGSRMHNSDEMD 227
+QTC K GS ++ ++D
Sbjct: 164 VQTCVLKLGSWTYDGFKVD 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D Q C
Sbjct: 104 RLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCE 163
Query: 186 FKFGSRMHNSDEMD 227
KFGS ++ ++D
Sbjct: 164 MKFGSWTYDGFQLD 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 1e-06
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.0 bits (99), Expect = 1e-06
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 179
SE +W PD+VL N A G + +A + G V W + + + +P D QT
Sbjct: 99 SEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQT 158
Query: 180 CTFKFGSRMHNSDEMD 227
C KFGS ++ ++D
Sbjct: 159 CFMKFGSWTYDGIQID 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 2e-06
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 185
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCD 126
Query: 186 FKFGSRMHNSDEMDFVI 236
KFGS ++ +++D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.3 bits (95), Expect = 4e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 6 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 176
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 177 TCTFKFGS 200
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.3 bits (90), Expect = 2e-05
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPND 170
SE +W PD+VL N A G+Y + +A + + G V W + + ++ +P D
Sbjct: 99 SEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFD 155
Query: 171 MQTCTFKFGSRMHNSDEMD 227
QTC KFGS ++ +D
Sbjct: 156 EQTCFMKFGSWTYDGYTVD 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.9 bits (89), Expect = 2e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 9 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 179
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 180 CTFKFGS 200
C +FGS
Sbjct: 144 CPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.7 bits (86), Expect = 5e-05
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 9 RLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 182
R+WRPD +L N A + V S+ G V W+ + + ++ +P D Q C
Sbjct: 86 RVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
Query: 183 TFKFGSRMHNSDEMD 227
K+ S ++ +++
Sbjct: 146 VLKWASWTYDGYQLE 160
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 2e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 12 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 182
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 183 TFKFGSRMHNSDEMDFV 233
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 4e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 6 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 176
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 177 TCTFKFGSRMHNSDEMDFVID 239
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 4e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 173
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 174 QTCTFKFGS 200
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 173
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 112 ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDR 171
Query: 174 QTCTFKFGSRMHNSDEMDFV 233
Q C+ + S +D++ F+
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 173
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 112 ASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDR 171
Query: 174 QTCTFKFGSRMHNSDEMDFV 233
Q C+ + S +D++ F+
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.008
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 6 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 167
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 168 DMQTCTFKFGS 200
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.008
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 6 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 167
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 168 DMQTCTFKFGS 200
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.5 bits (68), Expect = 0.008
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 6 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 167
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 168 DMQTCTFKFGS 200
D Q C + S
Sbjct: 87 DRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.010
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 182
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 183 TFKFGSRMHNSDEM 224
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.024
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 3 SERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--WPN 167
S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ WP
Sbjct: 112 SYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWWPY 168
Query: 168 DMQTCTFKFGSRMHNSDEM 224
D+ CT S H S+E+
Sbjct: 169 DILNCTIHIASWSHGSNEI 187
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.097
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 6 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 170
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 171 MQTCTFKFGSRMHNSDEM 224
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.68
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 81 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 233
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.68
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 81 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 233
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.68
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 81 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 233
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.68
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 81 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 233
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 288 CPVRCRARTVARWKLAWQCS 347
C VRC A + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,943
Number of Sequences: 438
Number of extensions: 2887
Number of successful extensions: 63
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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