Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00915
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0304 - 2502760-2502774,2502844-2502921,2503035-2503103,250...    34   0.13 
01_01_0026 + 201042-201110,201252-201359,202511-202639,203164-20...    30   2.2  
10_01_0122 + 1495426-1495815                                           29   2.9  
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196...    29   5.1  
12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110     28   8.8  

>08_01_0304 -
           2502760-2502774,2502844-2502921,2503035-2503103,
           2503200-2503289,2503400-2503517,2505548-2505678,
           2505756-2506025,2507175-2507308,2507635-2508088
          Length = 452

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 424 KTSGAFVLKRCTGVRIPLAGTNFSNEIRTKQMFTIDFHGE 305
           K  G  ++ RCTGV I   G N   +I T      DFHGE
Sbjct: 150 KKDGGGLISRCTGVVIGWDGANKRAKILTAASVVCDFHGE 189


>01_01_0026 +
           201042-201110,201252-201359,202511-202639,203164-203440,
           203543-203647,203730-203875,204042-204149,204290-204378,
           204552-205098
          Length = 525

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 CLVRISLE--KLVPASGIRTPVHRFNTNAPDVLSFR 434
           CLV+ SL+   + PA G + P H  + + P +L+FR
Sbjct: 335 CLVKDSLQFGSIAPACGAKDPHHLDSLSEPQILTFR 370


>10_01_0122 + 1495426-1495815
          Length = 129

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 2   FFFFFIA*LGGRAHSPPGVKWLLEPTYIYNVDAPPTLTYKFSSL 133
           FFFFF   L G   +  G +  L+P  +Y VD   ++     SL
Sbjct: 16  FFFFFFFFLSGCLRAGAGDRGALDPVLLYGVDNAHSMVSSVHSL 59


>09_02_0602 -
           11118788-11119178,11119262-11119451,11119590-11119658,
           11119890-11120016,11120134-11120399,11120760-11120872,
           11121693-11121764,11121860-11121998,11124277-11124360,
           11125278-11125771,11127604-11128187
          Length = 842

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +2

Query: 254 YAIYNFAGLIFITR-RYSFTVEINREHLFSTYFIRKIGTRQWDSNTGASLQHECTGRLIF 430
           YA+    G I++ R R+++    +  +  S  F   +G  +WD    A+   E +   +F
Sbjct: 74  YALPTVPGAIYLVRLRFAYG-NYDNMNSESVQFDLFLGVNKWDEVYIANKDKEYSSEAMF 132

Query: 431 *ATTASCCLCAKITYQG 481
            A  +   +C   TYQG
Sbjct: 133 VAWASWASVCLVNTYQG 149


>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
          Length = 530

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +1

Query: 91  RRRATHLDLQVFKSQYSYNGCPAIQTETHY-CFTAEIGRAVVPIRANSQVVLPPVIRNL* 267
           R R  H+    + S+ S NG P ++       FT  +    + I+A   V  PP IR++ 
Sbjct: 318 RLRKLHMH-HTWPSRISINGAPRLRKIVSLDLFTTVLEIQGIVIKAG-MVEQPPEIRSVR 375

Query: 268 FCGFDLYYTTL 300
           + G  + YTT+
Sbjct: 376 YLGLRVNYTTM 386


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,544,212
Number of Sequences: 37544
Number of extensions: 471704
Number of successful extensions: 951
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)