Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00913
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 134 1e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 133 3e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 112 4e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 93 3e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 82 7e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 46 4e-06
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 40 4e-04
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 30 0.29
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 29 0.66
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.66
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 29 0.66
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 1.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 2.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 4.7
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 26 6.1
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 6.1
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 6.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 6.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 6.1
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 25 8.1
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 8.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 8.1
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 25 8.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 134 bits (324), Expect = 1e-32
Identities = 66/85 (77%), Positives = 68/85 (80%)
Frame = +1
Query: 256 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 435
ETAGGVMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+G
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSG 461
Query: 436 IPPAPRGVPQNEVTFDIDANGILNV 510
IPPAPRGVPQ EVTFD+DANGILNV
Sbjct: 462 IPPAPRGVPQIEVTFDVDANGILNV 486
Score = 93.9 bits (223), Expect = 2e-20
Identities = 43/67 (64%), Positives = 55/67 (82%)
Frame = +3
Query: 510 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 689
SA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S
Sbjct: 487 SALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYS 546
Query: 690 MKSTMED 710
++++++D
Sbjct: 547 LRNSLDD 553
Score = 90.2 bits (214), Expect = 3e-19
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2
Query: 8 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 187
LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L
Sbjct: 319 LRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVL 378
Query: 188 HGDKSEEVQD 217
GD SE+ QD
Sbjct: 379 TGDTSEKTQD 388
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 133 bits (321), Expect = 3e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = +1
Query: 256 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 435
ETAGGVMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+G
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSG 461
Query: 436 IPPAPRGVPQNEVTFDIDANGILNV 510
IPPAPRGVPQ EVTFD+DANGILNV
Sbjct: 462 IPPAPRGVPQIEVTFDVDANGILNV 486
Score = 95.5 bits (227), Expect = 7e-21
Identities = 43/67 (64%), Positives = 56/67 (83%)
Frame = +3
Query: 510 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 689
SA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S
Sbjct: 487 SALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYS 546
Query: 690 MKSTMED 710
++++++D
Sbjct: 547 LRNSLDD 553
Score = 89.8 bits (213), Expect = 3e-19
Identities = 43/72 (59%), Positives = 53/72 (73%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXX 181
K LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 317 KVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAA 376
Query: 182 ILHGDKSEEVQD 217
IL GD SE+ QD
Sbjct: 377 ILVGDTSEKTQD 388
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 112 bits (270), Expect = 4e-26
Identities = 55/85 (64%), Positives = 61/85 (71%)
Frame = +1
Query: 256 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 435
ET GGVMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L G
Sbjct: 431 ETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRG 490
Query: 436 IPPAPRGVPQNEVTFDIDANGILNV 510
IPPAPRGVPQ EVTF++DANG+L V
Sbjct: 491 IPPAPRGVPQIEVTFEVDANGVLTV 515
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 SAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 686
SA++KS K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +
Sbjct: 516 SAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAY 575
Query: 687 SMKSTMEDE 713
S+K +D+
Sbjct: 576 SLKGQFDDD 584
Score = 68.9 bits (161), Expect = 7e-13
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +2
Query: 8 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 187
L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L
Sbjct: 351 LKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVL 409
Query: 188 HGDKSEE 208
G++ +
Sbjct: 410 SGEEGSD 416
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 93.5 bits (222), Expect = 3e-20
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 256 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 435
ET GGV T LI RN +D Q V I+VF+GER + +DN L+G F+LTG
Sbjct: 445 ETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTG 504
Query: 436 IPPAPRGVPQNEVTFDIDANGILNV 510
I PAP+G PQ EV+FD+DA+GI+NV
Sbjct: 505 IAPAPKGQPQIEVSFDVDADGIINV 529
Score = 57.6 bits (133), Expect = 2e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +3
Query: 510 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 689
SA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C
Sbjct: 530 SARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTD 588
Query: 690 MKSTME 707
++S ++
Sbjct: 589 IESNLD 594
Score = 49.6 bits (113), Expect = 4e-07
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXX 181
++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 365 RALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGG 423
Query: 182 ILHG 193
+L G
Sbjct: 424 VLSG 427
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 82.2 bits (194), Expect = 7e-17
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 148
K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDE 369
Score = 70.9 bits (166), Expect = 2e-13
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1
Query: 265 GGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 444
G V + RN +DNQ V V++GER +N LG+F+LTGIPP
Sbjct: 410 GNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPP 469
Query: 445 APRGVPQNEVTFDIDANGILNV 510
PRG + E TF++DANGIL V
Sbjct: 470 MPRGQAELEATFELDANGILKV 491
Score = 55.2 bits (127), Expect = 9e-09
Identities = 23/67 (34%), Positives = 44/67 (65%)
Frame = +3
Query: 510 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 689
+A+EK+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY +
Sbjct: 492 TAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISN 551
Query: 690 MKSTMED 710
+++T+ +
Sbjct: 552 IETTISE 558
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 46.4 bits (105), Expect = 4e-06
Identities = 18/49 (36%), Positives = 35/49 (71%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 148
K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 353 KALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/49 (38%), Positives = 34/49 (69%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 148
K+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 325 KALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
Score = 32.7 bits (71), Expect = 0.054
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 522 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 698
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 699 TMED 710
++D
Sbjct: 593 KLDD 596
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 30.3 bits (65), Expect = 0.29
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 2 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 133
+++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 343 EAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.66
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +3
Query: 480 RHRCQRYPQRSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA 659
R+R ++ R + KE+ + N+K R +++I +M NE E + K+++ I+
Sbjct: 289 RYRREQLTNRKSGIPKLKKEHYERLNNEK-RAIQQKITQMTNETESFFQA--KEEKMIET 345
Query: 660 KNALES 677
++AL S
Sbjct: 346 RDALNS 351
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.66
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 564 KGRLSKEEIERMVNEAEKYRNEDD 635
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.66
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +3
Query: 501 PQRSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 680
PQ S +EK +K+ K++ +++ +S E +E + NE + D+Q + KNA +
Sbjct: 121 PQESMLEK-VSKKPKVSEAHNE-EISPENVETIENELDLPVKGKDEQTTGLVYKNANDLL 178
Query: 681 CFSMKSTMEDE 713
S+ S + D+
Sbjct: 179 TGSLLSFIVDD 189
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 531 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 686
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKF 576
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -3
Query: 229 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 62
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 61 THQYNIVDLSLIHLGIT 11
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 412 LGKFELTGIPPAPRGVPQNEVTFDIDANGILNV 510
L + +TG+ +G P N++T D+ G+ NV
Sbjct: 1498 LARTRITGVNRKVKGSPSNKLTMDMPRAGLRNV 1530
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 597 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 701
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 537 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 707
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 296 TLPSPLNRLRHSPPTLITNPEYSSKYLR 379
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 576 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 698
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 519 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 632
++S K + + K EE+E VNE E++R D
Sbjct: 263 KRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 564 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 674
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 525 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 686
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 564 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 713
+GR + + N+ E + DDKQ + KN+LE+ M+ + E
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIE 1308
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 6.1
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 429 DRDPT-GAAWRASK*GHLRHRCQRYPQRSAIEKSTN-KENKITITNDKGRLSKEEIERMV 602
+ PT G+ A + LR + + Q EK T + + +K + +KEE+E +
Sbjct: 1556 EHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEK-TKEELENQL 1614
Query: 603 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 713
NE + E ++Q + ++N ++ +K +E++
Sbjct: 1615 NEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEK 1651
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +3
Query: 513 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 668
A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 599 ALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 522 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 650
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 8.1
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Frame = +3
Query: 471 GHLRHRCQRYPQRSAIEKSTNKENKIT----ITNDKGRLSKEEIER-----MVNEAE-KY 620
GHL + P S IEK+T + +T N G+L K EIE ++N+
Sbjct: 1206 GHLDLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQVSLSI 1265
Query: 621 RNEDDKQKETIQAKNA 668
E K KE+ NA
Sbjct: 1266 EEEKPKNKESEVDNNA 1281
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +3
Query: 480 RHRCQRYPQRSAIEK---STNKENKITITNDKGRLSKEEIE 593
RHR +R ++ EK ST +++ IT++++KG + E+++
Sbjct: 551 RHREKRQLRKEKPEKKNNSTKQKDLITVSHNKGTTAIEDLD 591
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,801,560
Number of Sequences: 5004
Number of extensions: 51870
Number of successful extensions: 246
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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