Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00912
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 105 5e-23
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 104 7e-23
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 88 6e-18
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 44 2e-04
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 42 4e-04
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 40 0.002
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 40 0.003
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.0
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 29 3.1
09_04_0300 - 16488358-16488447,16488684-16489116,16489377-164896... 29 5.4
03_03_0006 - 13666961-13667755 29 5.4
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 7.2
06_03_1332 - 29403320-29407804 28 7.2
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 7.2
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 105 bits (251), Expect = 5e-23
Identities = 46/72 (63%), Positives = 61/72 (84%)
Frame = +2
Query: 551 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 730
+ + LVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 141 QSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVK 200
Query: 731 SGDRASFSKVVK 766
+ D+ FSK+++
Sbjct: 201 NEDKLEFSKILE 212
Score = 88.2 bits (209), Expect = 6e-18
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = +1
Query: 256 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 423
DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 43 DLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 98
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 194 NPLFEKRPKNFAIGQGIQP 250
NPLFEKRPK F IG + P
Sbjct: 22 NPLFEKRPKQFGIGGALPP 40
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 104 bits (250), Expect = 7e-23
Identities = 45/72 (62%), Positives = 61/72 (84%)
Frame = +2
Query: 551 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 730
+ + LVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVK 185
Query: 731 SGDRASFSKVVK 766
+ D+ FSK+++
Sbjct: 186 NEDKLEFSKILE 197
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +1
Query: 256 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 423
DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK ++L++ + E
Sbjct: 44 DLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 194 NPLFEKRPKNFAIGQGIQP 250
NPLFEKRPK F IG + P
Sbjct: 23 NPLFEKRPKQFGIGGALPP 41
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 88.2 bits (209), Expect = 6e-18
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = +1
Query: 256 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 423
DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 27 DLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 82
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +2
Query: 551 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 730
+ + LVVIAHDVDPIELV++LPALCRKM +VH+KT + L LT V+
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVK 170
Query: 731 SGDRASFSKVVK 766
+ D+ FSK+++
Sbjct: 171 NEDKLEFSKILE 182
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 194 NPLFEKRPKNFAIGQGIQP 250
NPLFEKRPK F IG + P
Sbjct: 6 NPLFEKRPKQFGIGGALPP 24
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 548 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRKTCTCLALT 721
R + L +IA ++ PI+++ +P LC + +PY V K L R TC L LT
Sbjct: 57 RRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLT 116
Query: 722 NVESGD 739
G+
Sbjct: 117 KPAKGE 122
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 548 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRKTCTCLALT 721
R L VIA ++ PI+++ +P LC + +PY V K L R TC L +T
Sbjct: 57 RRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMT 116
Query: 722 NVESGD 739
G+
Sbjct: 117 KPAKGE 122
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 569 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDR 742
VV+A D +P+E++L LP L VPY V K LG V R C +N S R
Sbjct: 52 VVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLR 111
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 569 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTN 724
VV+A D +P+E++L LP L VPY V K LG V R C +N
Sbjct: 54 VVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSN 107
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 291 PHPAPEGCTSASSESAPSDQP 353
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 498 KEAHTIRSGTNTVTKLVEKKKAHLWSSLMMLIPLSWSFSCQRYAVK 635
+EA +R + + K VE+ K +S + L+ L W +C RY ++
Sbjct: 343 QEADHLRQENDKLAKEVEQLKTDRFSDVEELVYLKWINACLRYELR 388
>09_04_0300 -
16488358-16488447,16488684-16489116,16489377-16489642,
16490015-16490044,16490282-16490606,16491752-16492035,
16492154-16492376,16493117-16493173,16494454-16494947
Length = 733
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 531 CLCRIGWYGPLWWRLIFLGNLSFSSFPQ 448
C +G WW L+FL N +SFPQ
Sbjct: 70 CCWLVGCVCSAWWLLLFLYNAMPASFPQ 97
>03_03_0006 - 13666961-13667755
Length = 264
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 494 HQRGPYHPIRHKHSHQAGREEEGALVVI 577
H G +H +RH+H H R G V+
Sbjct: 95 HGGGDHHRVRHRHRHHRDRGRRGHAAVV 122
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 498 KEAHTIRSGTNTVTKLVEKKKAHLWSSLMMLIPLSWSFSCQRYAVK 635
+E + +R +TK VE + + +S + L+ L W +C RY ++
Sbjct: 286 EEINKLRHANEDLTKQVEGLQMNRFSEVEELVYLRWVNACLRYELR 331
>06_03_1332 - 29403320-29407804
Length = 1494
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 311 AFWRWMRIYLGHLTNLDKSELAECP 237
AFWR R+ G+LT+L + +L +CP
Sbjct: 1072 AFWR--RLVFGNLTDLKELDLKKCP 1094
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 239 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 147
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,784,201
Number of Sequences: 37544
Number of extensions: 425791
Number of successful extensions: 1423
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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