Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00910
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 51 8e-07
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 43 3e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 0.002
01_01_1152 + 9170628-9171899 38 0.006
11_01_0767 + 6438648-6438809,6439146-6440000 38 0.010
11_02_0012 - 7346282-7347136,7347234-7347593 36 0.024
05_06_0044 - 25150322-25151260 36 0.031
11_02_0011 - 7337618-7338496,7338596-7338991 36 0.041
11_02_0014 - 7352619-7352918,7353173-7353418 33 0.22
11_01_0750 - 6315126-6315896,6316371-6316784 33 0.29
09_06_0316 + 22262652-22263872 32 0.51
09_06_0313 + 22240971-22242176 32 0.51
05_03_0421 + 13768048-13768879,13769054-13769316,13775572-13775691 30 1.6
07_01_0866 - 7195305-7195756,7197171-7197447 29 2.7
05_05_0373 - 24478361-24479383 29 3.6
06_03_1260 + 28805490-28805706,28807167-28807387 29 4.8
11_01_0771 + 6453130-6454488 28 6.3
01_06_0373 - 28841462-28842850 28 8.3
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 444
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 445 RIKDLVNPDSLSSATAAVLVNA 510
RIKD + D++ AT AVL NA
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNA 177
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYKRGDYKY 635
+YFKG W SKFD R TSD FY+ + + P M G ++Y
Sbjct: 178 LYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQY 218
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMM 611
+YFKGAW+ KFD T D +F++ + K+++ P M
Sbjct: 250 LYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM 283
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYKR 620
+YFKGAW+ KFD T D +F++ + ++++ P M R
Sbjct: 502 LYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR 538
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMM 611
+YFKGAW+ KFD T D +F + + K++ P M
Sbjct: 42 LYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM 75
>01_01_1152 + 9170628-9171899
Length = 423
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 295 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVNPD 471
V+V G L FA + + + + DF+ A+ +N +V + T I+D++ P+
Sbjct: 123 VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPN 182
Query: 472 SLSSATAAVLVNA 510
S+ S+T VL NA
Sbjct: 183 SVDSSTVVVLANA 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMM 611
++FKG WS F T F++ + ++ P M
Sbjct: 196 VHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFM 229
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYK-RGDYKY 635
IYFKG W + FD+ T++R+F + +++VP M + G Y +
Sbjct: 95 IYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHH 137
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 355 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNA 510
+ +DF + V A K IN WV T N I +++ P+S S T V+ NA
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNA 94
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 379 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNA 510
DF + ++ K IN WV + TN I++++ S+ TA VLVNA
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNA 160
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYKRGDYKYG 638
IYFKG WS+ F T+ F+ + ++ P M R D G
Sbjct: 161 IYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIG 203
>05_06_0044 - 25150322-25151260
Length = 312
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMM 611
+YF W F LT + DF+VS D ++VP M
Sbjct: 84 LYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 295 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVN 465
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+++
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILS 57
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYKRGDYKYG 638
IYFKG WS+ F T+ F+ + ++ VP M R D G
Sbjct: 173 IYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIG 215
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 406 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNA 510
K IN WV + TN I +++ S+ TA VLVNA
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNA 172
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 406 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNA 510
K IN+WV + TN I +++ S+ T VLVNA
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNA 122
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMMYKRGDYKYG 638
IYFKG WS F T+ F+ + ++ V M R D G
Sbjct: 123 IYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIG 165
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFYVSEDKTIKVPMM 611
+YF+G W + D R T+++ FY + +++VP +
Sbjct: 179 LYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFV 212
>09_06_0316 + 22262652-22263872
Length = 406
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 296 TLFAILSSTPLIDR-DHGFYSRILFV*HRRQGSR*LSKALHGFHHQKLKLTERE 138
T F +L+ P+I R D F + I+F H R+G+ L K L F + + LT+ E
Sbjct: 272 TRFVMLAREPIIPRTDRPFKTSIVFA-HDREGTSVLFKVLSAFAFRDISLTKIE 324
>09_06_0313 + 22240971-22242176
Length = 401
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 296 TLFAILSSTPLIDR-DHGFYSRILFV*HRRQGSR*LSKALHGFHHQKLKLTERE 138
T F +L+ P+I R D F + I+F H R+G+ L K L F + + LT+ E
Sbjct: 264 TRFVMLAREPIIPRTDRPFKTSIVFA-HDREGTSVLFKVLSAFAFRDISLTKIE 316
>05_03_0421 + 13768048-13768879,13769054-13769316,13775572-13775691
Length = 404
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 140 LAQLALASDGETHEELLKAIGFPDDDAIRTE-FASKSRDLDQLKALSLKWRIKYTF 304
+A +A S + L + DDD+ F ++ R + QL+ + WR+K TF
Sbjct: 327 VATVAFKSSSSSKARLFNNLSDDDDDSYHYSCFMAQGRKMLQLRKIRSSWRLKPTF 382
>07_01_0866 - 7195305-7195756,7197171-7197447
Length = 242
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 137 PLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLDQLK 268
PLA A T E++ IG+ DDD + RD+D ++
Sbjct: 86 PLAAAAADPAPATRREVVLCIGYDDDDLALVDVTYPKRDVDNMQ 129
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 397 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 504
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>06_03_1260 + 28805490-28805706,28807167-28807387
Length = 145
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 137 PLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLDQLK 268
PLA A T E++ IG+ DDD + RD+D ++
Sbjct: 66 PLAAAAADLVPVTRREVVLCIGYDDDDLALVDITYPKRDVDNMQ 109
>11_01_0771 + 6453130-6454488
Length = 452
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 510 IYFKGAWSSKFDERLTSDRDFY 575
IYFKG W F+E T + FY
Sbjct: 210 IYFKGKWDRPFNESDTERKPFY 231
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 110 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 253
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,689
Number of Sequences: 37544
Number of extensions: 325452
Number of successful extensions: 921
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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