Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00909
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0155 - 20712601-20713553,20713618-20714000,20714240-207142...    32   0.51 
03_05_0982 - 29394513-29394719,29395314-29395327,29395652-293956...    29   2.7  
04_03_0029 - 9714031-9714072,9714196-9714219,9714343-9714406,971...    29   4.7  

>11_06_0155 -
           20712601-20713553,20713618-20714000,20714240-20714271,
           20714315-20714571,20714699-20714724,20714894-20715081,
           20715302-20715595,20715714-20715752,20715827-20715944,
           20716076-20716157,20716610-20716668,20717156-20717221,
           20717358-20717447,20718142-20718236
          Length = 893

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 209 HEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWV 96
           H+   +LK DAH  S+    +W     VD  P  +GW+
Sbjct: 280 HKISTTLKKDAHARSFECGQIWALYSEVDKFPKLYGWI 317


>03_05_0982 -
           29394513-29394719,29395314-29395327,29395652-29395697,
           29395798-29396040
          Length = 169

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 478 RHWSPASELDLISSDDFHP 534
           RHW P+ E+  +  D +HP
Sbjct: 129 RHWKPSDEMQFVMMDGYHP 147


>04_03_0029 -
           9714031-9714072,9714196-9714219,9714343-9714406,
           9714763-9715007,9715258-9715579,9715727-9715951,
           9716067-9716233,9716340-9716456,9716547-9716723,
           9716866-9716961,9717083-9717299,9717385-9717503,
           9717591-9717783,9717913-9718067,9718160-9718292,
           9718846-9718946
          Length = 798

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 358 EYTMYLKLDMNVEEYGDRKAWG 293
           +YT YLK +   +E+G  K WG
Sbjct: 224 KYTPYLKFEQRFQEWGLEKGWG 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,521,975
Number of Sequences: 37544
Number of extensions: 348627
Number of successful extensions: 1097
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)