Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00909
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical pr...    34   0.086
Z81078-4|CAJ15165.1|  392|Caenorhabditis elegans Hypothetical pr...    32   0.35 
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U41558-1|AAK39248.1|  333|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AC006695-17|AAF39983.2|  327|Caenorhabditis elegans Hypothetical...    28   5.6  

>U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical
           protein C13A10.1 protein.
          Length = 477

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -3

Query: 269 PSVEATPVV-LETGNVLLIENHEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWVI 93
           P+    P++ L T +  L E++  G S +LD  V ++G+ +L+   GN+  N  Y+G  +
Sbjct: 318 PNWLKNPILNLMTSSEFLTEDYGSGPSWRLDTVVSTHGNLVLYDRYGNLT-NVIYYGMNV 376

Query: 92  NAWQ 81
           NA Q
Sbjct: 377 NATQ 380


>Z81078-4|CAJ15165.1|  392|Caenorhabditis elegans Hypothetical
           protein F36H2.5 protein.
          Length = 392

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 181 SSFRLCPYSWFSMSKTLPVSSTTGVASTDGLSRSSCWNPTL-SCLRTLLRSCPASG 345
           S+  L PY   + +  L    TT   S   L  +  WNP   +C+ TLLR  PA G
Sbjct: 172 SAIGLGPYPTGTSATVLCNIGTTLSGSASSLCTNGVWNPLPGTCIATLLRKPPAKG 227


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +1

Query: 169  STCASSFRLCPYSWFSMSKTLPVSSTTGVASTDGLSRSSCWNPTLSCLRTLLRSCPAS 342
            ST  SSF+  P S   +  + P+ STT  +ST G + S   + + + L  L  S P++
Sbjct: 1334 STSGSSFKTSPSSISPVPTSSPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPST 1391


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 232 PVSSTTGVASTDGLSRSSCWNPTLSCLRTLLRSCPAS 342
           P+SS + V   DGLS    W P + CL  ++    A+
Sbjct: 388 PISSWSLVVDLDGLSMRHLWRPGVQCLLKIIEIVEAN 424


>U41558-1|AAK39248.1|  333|Caenorhabditis elegans Hypothetical
           protein K02B2.3 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 267 WPFSFELLEPHAFLSPYSSTFMSSFRYIVYSVFNILYSS 383
           W +S++++EP  + + Y ST  ++F Y +Y+  +  Y S
Sbjct: 235 WEYSWDIMEPVTYFATY-STVCATFGYYLYTQQSFEYPS 272


>AC006695-17|AAF39983.2|  327|Caenorhabditis elegans Hypothetical
           protein W06H8.6 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 487 SPASELDLISSDDFHPFLLGDQFDFRRKKSLTISWCPADHNLSA 618
           +P  + +  +S DF   + GD+F+    ++ T SW   D  L +
Sbjct: 196 APQKQEERGASTDFSGMMFGDEFEMEEAETKTWSWSSGDSILDS 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,097
Number of Sequences: 27780
Number of extensions: 301337
Number of successful extensions: 971
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)