Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00909
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          31   0.011
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      31   0.011
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 31.1 bits (67), Expect = 0.011
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -1

Query: 505 QALKLDSNVDSYNNRLAWGDSKDKTSHRVSWKFIPVWENNKLLYKILNTEYTMYLKLDMN 326
           QA  +++N+DSY N  A  +      H +    +P  E   L Y  L  E +   KL  +
Sbjct: 62  QAWNIEANIDSYTNAAAVKEFLSIYKHGM----LPRGELFSLYYPQLLREMSALFKLFYH 117

Query: 325 VEEYG---DRKAWGSNNSNEKGHLWKL 254
            +++        W  NN NE  +++ L
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSL 144


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 31.1 bits (67), Expect = 0.011
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -1

Query: 505 QALKLDSNVDSYNNRLAWGDSKDKTSHRVSWKFIPVWENNKLLYKILNTEYTMYLKLDMN 326
           QA  +++N+DSY N  A  +      H +    +P  E   L Y  L  E +   KL  +
Sbjct: 62  QAWNIEANIDSYTNAAAVKEFLSIYKHGM----LPRGELFSLYYPQLLREMSALFKLFYH 117

Query: 325 VEEYG---DRKAWGSNNSNEKGHLWKL 254
            +++        W  NN NE  +++ L
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSL 144


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 547 DQFDFRRKKSLTISWCPADHNLSAYGTR 630
           D  DF R  SL +SW     NL   G +
Sbjct: 225 DSIDFDRMNSLGLSWLDQLTNLGFLGMK 252


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 547 DQFDFRRKKSLTISWCPADHNLSAYGTR 630
           D  DF R  SL +SW     NL   G +
Sbjct: 263 DSIDFDRMNSLGLSWLDQLTNLGFLGMK 290


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 YSVFNILYSSLLFSHTGINFQ 416
           Y +FN+  S LLF   G+ F+
Sbjct: 70  YYLFNLAVSDLLFLILGLPFE 90


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -1

Query: 610  SCGPPDTTI*SMTFSFGSQIDHQARKGENHRKILNQA 500
            +C P +    S    +G+  DH   +G   R+ +  A
Sbjct: 1812 NCAPEEDQYGSQYGQYGAPYDHYGSRGSVGRRSVGSA 1848


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 140 FPRAGGRRSCPRARLASDSARTR 208
           FPR+   +S PR +L++   R+R
Sbjct: 68  FPRSHRFKSLPRCQLSNKRDRSR 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,653
Number of Sequences: 438
Number of extensions: 3946
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)