Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00908
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQ21 Cluster: Methylated DNA-protein cysteine methylt...    49   1e-04
UniRef50_A6LDG3 Cluster: Hemolysin-related protein; n=2; Parabac...    34   4.4  
UniRef50_Q0TAS1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_A6GF43 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q9FI12 Cluster: Serine proteinase; n=7; Magnoliophyta|R...    33   7.8  

>UniRef50_Q1HQ21 Cluster: Methylated DNA-protein cysteine
           methyltransferase; n=1; Bombyx mori|Rep: Methylated
           DNA-protein cysteine methyltransferase - Bombyx mori
           (Silk moth)
          Length = 136

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = -3

Query: 715 VSSYFV*FTSGTANVNPSHNAAVCIQKLQK 626
           + S F  FTS TANVNPSHN AVCIQKLQK
Sbjct: 107 LGSDFQKFTSNTANVNPSHNTAVCIQKLQK 136


>UniRef50_A6LDG3 Cluster: Hemolysin-related protein; n=2;
           Parabacteroides|Rep: Hemolysin-related protein -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 450

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = -1

Query: 357 WLILLLCLFVGFSLDTWLFFFILAITCAEWISIVAEKEEITFISQLGTPLIDTGHLCLPC 178
           W+       +GF L+T L  F+L +       I A+K  + F+    + L      C P 
Sbjct: 105 WINFSAAPLLGFVLETILLTFLLLLFGEIMPKIYAQKNSLRFVRFSASVLSGLERFCRPF 164

Query: 177 SRLLKRGRSIVIKISRLKPF 118
           S++L    S++ K    K +
Sbjct: 165 SKILVNSTSVINKALAKKKY 184


>UniRef50_Q0TAS1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli 536|Rep: Putative uncharacterized
           protein - Escherichia coli O6:K15:H31 (strain 536 /
           UPEC)
          Length = 109

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 77  FMFSRLVHIIKQRLNGFKRDIFITMLRPR 163
           + FSRLV ++ +R NG KRD F T+L  R
Sbjct: 66  YHFSRLVFLVSRRKNGLKRDQFNTLLIDR 94


>UniRef50_A6GF43 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 407

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 393 FVSSTSKLVS*NWLILLLCLFVG-FSLDTWLFFFILAITCAEWISIVAEKEE 241
           ++S  S L    W  L +    G F +  WL FF+  + C  W+ + AE  E
Sbjct: 181 YMSGRSPLSPDAWAGLRIATLEGQFPIFPWLSFFLAGLACGRWVLVDAEPRE 232


>UniRef50_Q9FI12 Cluster: Serine proteinase; n=7; Magnoliophyta|Rep:
           Serine proteinase - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 840

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 92  LVHIIKQRLNGFKRDIFITMLRPRFSSRE-HGRQRCPVSMSGVPSWLIKVISSFSATIEI 268
           +VH+ +++    K+  F   LRPR +SR+ HG+ + P  +    S+L K +      I++
Sbjct: 48  IVHLFEEQELKHKKSKFTPKLRPRNNSRKRHGKSKIPSVVQSHDSFLRKTLKG-EKYIKL 106

Query: 269 HSAHVI 286
           +S H +
Sbjct: 107 YSYHYL 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,626,789
Number of Sequences: 1657284
Number of extensions: 14018899
Number of successful extensions: 32966
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32940
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)